BLASTX nr result

ID: Coptis25_contig00042322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042322
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139650.1| PREDICTED: FAM203 family protein DDB_G027686...    63   6e-08
ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|1...    60   4e-07
ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G027686...    59   9e-07
emb|CAN67031.1| hypothetical protein VITISV_032485 [Vitis vinifera]    59   9e-07
ref|NP_001064566.1| Os10g0406800 [Oryza sativa Japonica Group] g...    58   1e-06

>ref|XP_004139650.1| PREDICTED: FAM203 family protein DDB_G0276861-like [Cucumis
           sativus]
          Length = 332

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = +1

Query: 1   RRALWSINGPRVLQLGYEDEANGKVMEAYERIG 99
           RRA WSINGPR+LQ+GYEDE N KVMEAYER+G
Sbjct: 286 RRAFWSINGPRILQVGYEDEENPKVMEAYERVG 318


>ref|XP_002330666.1| predicted protein [Populus trichocarpa] gi|118489595|gb|ABK96599.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222872270|gb|EEF09401.1| predicted protein [Populus
           trichocarpa]
          Length = 336

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +1

Query: 4   RALWSINGPRVLQLGYEDEANGKVMEAYERIG 99
           RALWS+NGPR+LQ+GYEDE + KVMEAYER+G
Sbjct: 287 RALWSVNGPRILQVGYEDEEDPKVMEAYERVG 318


>ref|XP_002275397.1| PREDICTED: FAM203 family protein DDB_G0276861 [Vitis vinifera]
           gi|296086382|emb|CBI31971.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +1

Query: 1   RRALWSINGPRVLQLGYEDEANGKVMEAYERIG 99
           RRALWS+NGPR+LQ+GYEDE + KVMEA+E++G
Sbjct: 286 RRALWSVNGPRILQVGYEDEEDPKVMEAFEQVG 318


>emb|CAN67031.1| hypothetical protein VITISV_032485 [Vitis vinifera]
          Length = 330

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +1

Query: 1   RRALWSINGPRVLQLGYEDEANGKVMEAYERIG 99
           RRALWS+NGPR+LQ+GYEDE + KVMEA+E++G
Sbjct: 286 RRALWSVNGPRILQVGYEDEEDPKVMEAFEQVG 318


>ref|NP_001064566.1| Os10g0406800 [Oryza sativa Japonica Group]
           gi|78708600|gb|ABB47575.1| expressed protein [Oryza
           sativa Japonica Group] gi|113639175|dbj|BAF26480.1|
           Os10g0406800 [Oryza sativa Japonica Group]
          Length = 345

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = +1

Query: 1   RRALWSINGPRVLQLGYEDEANGKVMEAYERIG 99
           RRA WS+NGPR+LQ+GYEDE + KVMEAYE IG
Sbjct: 293 RRAFWSVNGPRILQVGYEDEEDPKVMEAYELIG 325


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