BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042305
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   178   5e-43
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         176   2e-42
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         176   2e-42
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   176   2e-42
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   176   2e-42

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  178 bits (451), Expect = 5e-43
 Identities = 89/107 (83%), Positives = 95/107 (88%)
 Frame = -1

Query: 321  KKNSSGEVERYKARLVAKEYSQRPGIDYAEVFAPVVRMETVRLIISLAAQNKWKIAEMDV 142
            KKNS GEVERYKARLVAK YSQR GIDY EVFAPV R+ETVRLIISLAAQNKWKI +MDV
Sbjct: 856  KKNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDV 915

Query: 141  KSAFLNGYLQEEVYVEQPMGYVRKGHEDKVLKLNKALYGLKQALRAW 1
            KSAFLNG L+EEVY+EQP GY+ KG EDKVL+L KALYGLKQA RAW
Sbjct: 916  KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAW 962


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/107 (81%), Positives = 94/107 (87%)
 Frame = -1

Query: 321 KKNSSGEVERYKARLVAKEYSQRPGIDYAEVFAPVVRMETVRLIISLAAQNKWKIAEMDV 142
           KKNS GEVERYKARLVAK YSQR GIDY E+FAPV R+ETVRLIISLAAQNKWKI +MDV
Sbjct: 385 KKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDV 444

Query: 141 KSAFLNGYLQEEVYVEQPMGYVRKGHEDKVLKLNKALYGLKQALRAW 1
           KSAFLNG L+EEVY+EQP GY+ KG EDKVL+L K LYGLKQA RAW
Sbjct: 445 KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 491


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/107 (82%), Positives = 94/107 (87%)
 Frame = -1

Query: 321  KKNSSGEVERYKARLVAKEYSQRPGIDYAEVFAPVVRMETVRLIISLAAQNKWKIAEMDV 142
            KKNS GEVERYKARLVAK YSQR GIDY EVFAPV R+ETVRLIISLAAQNKWKI +MDV
Sbjct: 888  KKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDV 947

Query: 141  KSAFLNGYLQEEVYVEQPMGYVRKGHEDKVLKLNKALYGLKQALRAW 1
            KSAFLNG L+EEVY+EQP GY+ KG EDKVL+L K LYGLKQA RAW
Sbjct: 948  KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  176 bits (446), Expect = 2e-42
 Identities = 87/107 (81%), Positives = 94/107 (87%)
 Frame = -1

Query: 321  KKNSSGEVERYKARLVAKEYSQRPGIDYAEVFAPVVRMETVRLIISLAAQNKWKIAEMDV 142
            KKNS GEVERYKARLVAK YSQR GIDY E+FAPV R+ETVRLIISLAAQNKWKI +MDV
Sbjct: 888  KKNSKGEVERYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDV 947

Query: 141  KSAFLNGYLQEEVYVEQPMGYVRKGHEDKVLKLNKALYGLKQALRAW 1
            KSAFLNG L+EEVY+EQP GY+ KG EDKVL+L K LYGLKQA RAW
Sbjct: 948  KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/107 (82%), Positives = 94/107 (87%)
 Frame = -1

Query: 321  KKNSSGEVERYKARLVAKEYSQRPGIDYAEVFAPVVRMETVRLIISLAAQNKWKIAEMDV 142
            KKNS GEVERYKARLVAK YSQR GIDY EVFAPV R+ETVRLIISLAAQNKWKI +MDV
Sbjct: 888  KKNSKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDV 947

Query: 141  KSAFLNGYLQEEVYVEQPMGYVRKGHEDKVLKLNKALYGLKQALRAW 1
            KSAFLNG L+EEVY+EQP GY+ KG EDKVL+L K LYGLKQA RAW
Sbjct: 948  KSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAW 994