BLASTX nr result

ID: Coptis25_contig00042298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042298
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269697.1| PREDICTED: uncharacterized protein LOC100243...    96   2e-18
ref|XP_002316205.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
ref|XP_002311231.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003552838.1| PREDICTED: uncharacterized protein LOC100785...    77   1e-12
ref|XP_003544078.1| PREDICTED: uncharacterized protein LOC100789...    77   1e-12

>ref|XP_002269697.1| PREDICTED: uncharacterized protein LOC100243314 [Vitis vinifera]
          Length = 492

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 25/110 (22%)
 Frame = +1

Query: 1   LFGCFMYNEDVKSIAEFPFSRPKTQELQQDITKT------------------------IT 108
           LFGCFMYNEDVKSIAEFPFSRP  QE+Q+D +K+                         +
Sbjct: 41  LFGCFMYNEDVKSIAEFPFSRPMGQEIQEDGSKSGDPVQESNSNEVDSTVWIGSRMKPRS 100

Query: 109 RKEAKLEEPINLKMIVAKDIKKEIELPAEKVEEDEA-IEVPPEDCDLFNG 255
           +   + +EP NL + VAK  +K IELP  + EED++ +E+PPEDCD+FNG
Sbjct: 101 QMSEETQEPENLSLTVAKQEEKNIELPVVEEEEDDSDVELPPEDCDVFNG 150


>ref|XP_002316205.1| predicted protein [Populus trichocarpa] gi|222865245|gb|EEF02376.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = +1

Query: 1   LFGCFMYNEDVKSIAEFPFSRPKTQELQQDITKTITRKEAKLEEPINLKMIVAKDIKKEI 180
           LFG FMYNEDVKSIAEFPFS PK+QE   + +K +T    +++E  NLK   +K+ +++I
Sbjct: 37  LFGVFMYNEDVKSIAEFPFSWPKSQE---EPSKGVTPGPGEVQESDNLKSSESKEDEEKI 93

Query: 181 ELPAEKVEEDEAIEVPPEDCDLFNG 255
           E P  + E+DE +E+PPE+CDLF G
Sbjct: 94  EFPVIE-EDDEDVELPPEECDLFTG 117


>ref|XP_002311231.1| predicted protein [Populus trichocarpa] gi|222851051|gb|EEE88598.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 29/114 (25%)
 Frame = +1

Query: 1   LFGCFMYNEDVKSIAEFPFSRPKTQELQQDITKTIT------RKEAKL------------ 126
           +FG FMYNEDVKSIAEFPFS PK+QE+Q++++K  T      +K+ +L            
Sbjct: 20  IFGVFMYNEDVKSIAEFPFSWPKSQEIQEELSKGTTPVQETLKKDRELPASVGSRTSLEE 79

Query: 127 ----------EEPINLKMIVAKDIKKEIELPAEKVEEDEA-IEVPPEDCDLFNG 255
                     +E   LK   +K+ +++IELP   +EED+  +E+PPE+CDLF G
Sbjct: 80  PQVDQEFEENQESDKLKSSGSKEDEEKIELPI--IEEDDVDVELPPEECDLFTG 131


>ref|XP_003552838.1| PREDICTED: uncharacterized protein LOC100785597 [Glycine max]
          Length = 473

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
 Frame = +1

Query: 1   LFGCFMYNEDVKSIAEFPFSRPKTQELQQDIT----------KTITRKEAKLEEPINLKM 150
           LFG FMYNEDVKS+AEF F RPK QE+Q++            +       + +EPI+LK 
Sbjct: 41  LFGVFMYNEDVKSMAEFTFLRPKAQEIQEETVSNNNSRTQPERNRVEDSEESQEPIDLKA 100

Query: 151 IVAKDIKKEIELPAEKVEEDEAIEVPPEDCDLFNG 255
           +VA++     ++  E  EE+E + +PPE+CDLF G
Sbjct: 101 VVAEE-----KIVEEYEEENEEVVLPPEECDLFTG 130


>ref|XP_003544078.1| PREDICTED: uncharacterized protein LOC100789919 [Glycine max]
          Length = 513

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 51/134 (38%), Positives = 66/134 (49%), Gaps = 49/134 (36%)
 Frame = +1

Query: 1   LFGCFMYNEDVKSIAEFPFSRPKTQELQQ--------------------------DITKT 102
           LFG FMYNEDVKSIAEFPFS PK  E Q+                          D+  +
Sbjct: 38  LFGLFMYNEDVKSIAEFPFSSPKAHETQEGGEPNKHVDSVQEDNVVVVQRESEKKDVEDS 97

Query: 103 ITRKEAK----------------LEEPINLKMIVAKDIKKEIELP-------AEKVEEDE 213
           +T K +K                 +E ++LK +V K+  K+IE+P        E+ EEDE
Sbjct: 98  VTVKISKSTSRAQLEKSGAEDEDSDERVDLKTVVEKE--KKIEMPRAEEEEEVEEEEEDE 155

Query: 214 AIEVPPEDCDLFNG 255
            +E+PPEDCDLF G
Sbjct: 156 KVELPPEDCDLFTG 169


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