BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042289
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1,...   219   2e-55
emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]   219   2e-55
ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus ...   213   1e-53
dbj|BAA94982.1| unnamed protein product [Arabidopsis thaliana]        210   1e-52
ref|NP_001189914.1| protein high chlorophyll fluorescent 107 [Ar...   210   1e-52

>ref|XP_002272572.1| PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Vitis
           vinifera] gi|296083248|emb|CBI22884.3| unnamed protein
           product [Vitis vinifera]
          Length = 651

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/116 (88%), Positives = 109/116 (93%)
 Frame = +3

Query: 3   YAARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLAL 182
           + AR+LFEKAVQASPKNRFAWHVWGVFEANLG  D GRKLLKIGHA+NPRDPVLLQSLAL
Sbjct: 333 HTARQLFEKAVQASPKNRFAWHVWGVFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLAL 392

Query: 183 LEYKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQID 350
           LEYK STANL+RV+FRRASELDPRHQPVWIAWGWMEWKEGNIATAR+ YQRAL ID
Sbjct: 393 LEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSID 448



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 42/112 (37%), Positives = 65/112 (58%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           AR+LF+ A  A  ++  AWH W V E   G I K R LL  G      +  + Q+LALLE
Sbjct: 233 ARDLFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLALLE 292

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQ 344
            K +    AR +F++A++ +P+    W+AW  +E ++ N  TARQ +++A+Q
Sbjct: 293 AKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQ 344


>emb|CAN76674.1| hypothetical protein VITISV_011791 [Vitis vinifera]
          Length = 629

 Score =  219 bits (557), Expect = 2e-55
 Identities = 103/116 (88%), Positives = 109/116 (93%)
 Frame = +3

Query: 3   YAARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLAL 182
           + AR+LFEKAVQASPKNRFAWHVWGVFEANLG  D GRKLLKIGHA+NPRDPVLLQSLAL
Sbjct: 333 HTARQLFEKAVQASPKNRFAWHVWGVFEANLGNADVGRKLLKIGHAVNPRDPVLLQSLAL 392

Query: 183 LEYKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQID 350
           LEYK STANL+RV+FRRASELDPRHQPVWIAWGWMEWKEGNIATAR+ YQRAL ID
Sbjct: 393 LEYKYSTANLSRVLFRRASELDPRHQPVWIAWGWMEWKEGNIATAREMYQRALSID 448



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 64/112 (57%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           AR+LF+ A  A  ++  AWH W V E   G I K R LL  G      +  + Q+L LLE
Sbjct: 233 ARDLFDAATVADKRHVAAWHGWAVLELKQGNIKKARHLLAKGLKYGGGNEYIYQTLXLLE 292

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQ 344
            K +    AR +F++A++ +P+    W+AW  +E ++ N  TARQ +++A+Q
Sbjct: 293 AKANRHEQARYLFKQATKCNPKSCASWLAWAQLEMQQENNHTARQLFEKAVQ 344


>ref|XP_002519222.1| pre-mRNA splicing factor, putative [Ricinus communis]
           gi|223541537|gb|EEF43086.1| pre-mRNA splicing factor,
           putative [Ricinus communis]
          Length = 648

 Score =  213 bits (542), Expect = 1e-53
 Identities = 99/114 (86%), Positives = 106/114 (92%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           ARELF+KAVQASPKNRFAWHVWGVFEAN+G I+  RKLLKIGH LNPRDPVLLQSLALLE
Sbjct: 346 ARELFQKAVQASPKNRFAWHVWGVFEANIGNIEMARKLLKIGHTLNPRDPVLLQSLALLE 405

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQID 350
           YK STANLARV+FRRASELDP+HQPVWIAWGWMEWKEGNI+ AR+ YQRAL ID
Sbjct: 406 YKHSTANLARVLFRRASELDPKHQPVWIAWGWMEWKEGNISAARELYQRALSID 459



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/112 (39%), Positives = 66/112 (58%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           ARELF+ A  A  ++  AWH W V E   G I K R+LL  G      +  + Q+LALLE
Sbjct: 244 ARELFDAATVADKRHIAAWHGWAVLELKQGNIKKARQLLAKGIKFCGGNEYIYQTLALLE 303

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQ 344
            K +    AR +FR+A++ +P+    W+AW  +E ++ N  TAR+ +Q+A+Q
Sbjct: 304 AKANRYEQARYLFRQATKCNPKSCASWLAWAQVEVQQENNLTARELFQKAVQ 355


>dbj|BAA94982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 744

 Score =  210 bits (534), Expect = 1e-52
 Identities = 97/115 (84%), Positives = 105/115 (91%)
 Frame = +3

Query: 6   AARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALL 185
           AAR+LFEKAVQASPKNRFAWHVWGVFEA +G +++GRKLLKIGHALNPRDPVLLQSL LL
Sbjct: 357 AARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLL 416

Query: 186 EYKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQID 350
           EYK S+ANLAR + RRASELDPRHQPVWIAWGWMEWKEGN  TAR+ YQRAL ID
Sbjct: 417 EYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSID 471



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           ARELF+ A  A  K+  AWH W   E   G I K R LL  G     R+  + Q+LALLE
Sbjct: 256 ARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQTLALLE 315

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQ 344
            K      AR +F++A+  + R    W+AW  +E ++     AR+ +++A+Q
Sbjct: 316 AKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQ 367


>ref|NP_001189914.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana]
           gi|332642377|gb|AEE75898.1| protein high chlorophyll
           fluorescent 107 [Arabidopsis thaliana]
          Length = 618

 Score =  210 bits (534), Expect = 1e-52
 Identities = 97/115 (84%), Positives = 105/115 (91%)
 Frame = +3

Query: 6   AARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALL 185
           AAR+LFEKAVQASPKNRFAWHVWGVFEA +G +++GRKLLKIGHALNPRDPVLLQSL LL
Sbjct: 323 AARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLL 382

Query: 186 EYKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQID 350
           EYK S+ANLAR + RRASELDPRHQPVWIAWGWMEWKEGN  TAR+ YQRAL ID
Sbjct: 383 EYKHSSANLARALLRRASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSID 437



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/112 (36%), Positives = 60/112 (53%)
 Frame = +3

Query: 9   ARELFEKAVQASPKNRFAWHVWGVFEANLGYIDKGRKLLKIGHALNPRDPVLLQSLALLE 188
           ARELF+ A  A  K+  AWH W   E   G I K R LL  G     R+  + Q+LALLE
Sbjct: 222 ARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQTLALLE 281

Query: 189 YKESTANLARVIFRRASELDPRHQPVWIAWGWMEWKEGNIATARQFYQRALQ 344
            K      AR +F++A+  + R    W+AW  +E ++     AR+ +++A+Q
Sbjct: 282 AKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQ 333