BLASTX nr result

ID: Coptis25_contig00042288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042288
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]    47   9e-10
emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]    46   9e-09
emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]    47   3e-08
ref|XP_003520298.1| PREDICTED: uncharacterized protein LOC100797...    41   2e-06
ref|XP_002265792.1| PREDICTED: uncharacterized protein LOC100243...    39   2e-06

>emb|CAN74420.1| hypothetical protein VITISV_024222 [Vitis vinifera]
          Length = 549

 Score = 46.6 bits (109), Expect(2) = 9e-10
 Identities = 21/49 (42%), Positives = 33/49 (67%)
 Frame = +2

Query: 236 NYFWETLSKLLKLALQFSTNILLQSDG*IEAVNHNLGDLFRCLAVESLK 382
           +YFW+TL   L   L+FS++   Q+DG  + VNH+LG+L RC+  + L+
Sbjct: 462 SYFWKTLWAKLGTQLKFSSSFHPQTDGQTKVVNHSLGNLLRCIVRDQLR 510



 Score = 41.2 bits (95), Expect(2) = 9e-10
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
 Frame = +3

Query: 3   KSTERNGGLGSP--VPDWPWLNVSIDFILGL-------------IDSCRSLTILQYGLLG 137
           K +++N GL +P  +P  PW ++S+DF+LGL             +D    +T        
Sbjct: 369 KGSKQNTGLYTPLPIPSKPWEDLSMDFVLGLPMTQWGFNSIFVVVDRFSKMTHFIPRKKA 428

Query: 138 SL*TNL*CRIAAHIAHCHGLPYSITSDRDLNAQTIFGK 251
           S  + +       +   HGLP SI SDRD+   + F K
Sbjct: 429 SDASYVAALFFKEVVRLHGLPQSIVSDRDVKFMSYFWK 466


>emb|CAN72135.1| hypothetical protein VITISV_017100 [Vitis vinifera]
          Length = 587

 Score = 46.2 bits (108), Expect(2) = 9e-09
 Identities = 24/48 (50%), Positives = 29/48 (60%)
 Frame = +2

Query: 242 FWETLSKLLKLALQFSTNILLQSDG*IEAVNHNLGDLFRCLAVESLKK 385
           FW TL K     LQ+ST+   Q DG  E VN +LGDL RCL  E+ K+
Sbjct: 502 FWRTLWKKFGTKLQYSTSYHPQMDGQTEVVNRSLGDLLRCLVGENPKQ 549



 Score = 38.1 bits (87), Expect(2) = 9e-09
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = +3

Query: 3   KSTERNGGLGSP--VPDWPWLNVSIDFILGLIDSCRSLT---ILQYGLLGSL*TNL*CRI 167
           K   +N GL +P  VP  PW +VS+DF++GL  + + +      +  +  S   NL  R 
Sbjct: 420 KGKVQNTGLYTPLPVPTAPWEDVSMDFVVGLPRNFQKMAHFICCKKTMDASNIANLYFR- 478

Query: 168 AAHIAHCHGLPYSITSDRD 224
              +   HG+P SITSD+D
Sbjct: 479 --EVVRLHGVPKSITSDQD 495


>emb|CAN77045.1| hypothetical protein VITISV_035256 [Vitis vinifera]
          Length = 665

 Score = 46.6 bits (109), Expect(2) = 3e-08
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = +2

Query: 236 NYFWETLSKLLKLALQFSTNILLQSDG*IEAVNHNLGDLFRCLAVE 373
           +YFW +L K+L   L+FS+    Q++G  E VN +LGDL RCL  E
Sbjct: 496 SYFWRSLWKMLNTKLKFSSAFHPQTEGQTEVVNRSLGDLLRCLVGE 541



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 15/96 (15%)
 Frame = +3

Query: 3   KSTERNGGLGSP--VPDWPWLNVSIDFILGLIDSCR--SLTILQYGLLGSL*TNL*CR-- 164
           K  ++N GL  P  VP  PW  +SIDF+LGL  + R      +       +   + C   
Sbjct: 403 KGRKKNTGLYMPLPVPHEPWQELSIDFVLGLPKTFRRHDSIFVMVDRFSKMVHFIPCSKT 462

Query: 165 -IAAHIA--------HCHGLPYSITSDRDLNAQTIF 245
             A H+A          HGLP +I SD+D    + F
Sbjct: 463 LDAVHVAKLFFKEIVRLHGLPKTIVSDQDAKFMSYF 498


>ref|XP_003520298.1| PREDICTED: uncharacterized protein LOC100797944 [Glycine max]
          Length = 893

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 13/76 (17%)
 Frame = +3

Query: 36  PVPDWPWLNVSIDFILGL--IDSCRSLTILQYGLLGSL*TNL*CR---IAAHIA------ 182
           P+P++PW+++S+DF+LGL    + R    +       +   + C+    A+H+A      
Sbjct: 743 PIPEYPWIDLSMDFVLGLPKTSNGRDSIFVVVDRFSKMAHFIPCKKIDDASHVADLFFKE 802

Query: 183 --HCHGLPYSITSDRD 224
               HGLP SI SDRD
Sbjct: 803 IVRLHGLPRSIVSDRD 818



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 19/41 (46%), Positives = 22/41 (53%)
 Frame = +2

Query: 236 NYFWETLSKLLKLALQFSTNILLQSDG*IEAVNHNLGDLFR 358
           ++FW TL   L   L FST    Q+DG  E VN  LG L R
Sbjct: 823 SHFWRTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLGTLLR 863


>ref|XP_002265792.1| PREDICTED: uncharacterized protein LOC100243318 [Vitis vinifera]
          Length = 623

 Score = 39.3 bits (90), Expect(2) = 2e-06
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 236 NYFWETLSKLLKLALQFSTNILLQSDG*IEAVNHNLGDLFRCL 364
           +YFW+TL   +   L FS+    Q+DG  E  N +LG+L RCL
Sbjct: 420 SYFWKTLWARMGTKLLFSSAFHPQTDGQTEVTNRSLGNLLRCL 462



 Score = 37.4 bits (85), Expect(2) = 2e-06
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
 Frame = +3

Query: 3   KSTERNGGLGSP--VPDWPWLNVSIDFILGLIDSCR--SLTILQYGLLGSL*TNL*CR-- 164
           K  ++  GL +P  +PD PW ++S+DF+LGL  + R     ++       +   + C   
Sbjct: 327 KGIKQQAGLYTPLPIPDKPWQHISMDFVLGLPKTLRQHDSIMVVVDRFSKMTHFIPCHKT 386

Query: 165 ---------IAAHIAHCHGLPYSITSDRDLNAQTIFGK 251
                        +   HG+P  I SDRD+   + F K
Sbjct: 387 YDVSKTAALFLQEVIRLHGVPAPIVSDRDVKFMSYFWK 424


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