BLASTX nr result

ID: Coptis25_contig00042278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042278
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]   149   2e-34
emb|CBI20858.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   144   6e-33
emb|CBI20860.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_003527837.1| PREDICTED: carotenoid 9,10(9',10')-cleavage ...   137   7e-31

>emb|CAN66950.1| hypothetical protein VITISV_020097 [Vitis vinifera]
          Length = 1199

 Score =  149 bits (377), Expect = 2e-34
 Identities = 70/113 (61%), Positives = 88/113 (77%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2    SSAGL-KYGMLAKLYFEELLSRPTETKEHFGSEEIVKVEYHKLEENNFCTGAAFVSKLGG 178
            SS G+ KYG LAKLYFEE    P       G  +++KVEYH+ EENNFC+G+AFV K GG
Sbjct: 1083 SSCGMAKYGGLAKLYFEEQDKTPPARDGKKG--QLIKVEYHRFEENNFCSGSAFVPKQGG 1140

Query: 179  RDEDDGWIVCFVHNEETDVSQVHIIDTKNFEGEPVVKLTLPQRVPYGFHGTYV 337
             +EDDGWI+ FVHNE+T++SQVHIID + F+ +PV K+TLPQRVPYGFHGT++
Sbjct: 1141 VEEDDGWIISFVHNEDTNISQVHIIDARKFDSKPVAKITLPQRVPYGFHGTFI 1193


>emb|CBI20858.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/113 (61%), Positives = 87/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2    SSAGL-KYGMLAKLYFEELLSRPTETKEHFGSEEIVKVEYHKLEENNFCTGAAFVSKLGG 178
            SS G+ KYG LAKLYFEE     T         +++KVEYH+ EENNFC+G+AFV K GG
Sbjct: 938  SSCGMAKYGGLAKLYFEE--QDKTLPARDGKKGQLIKVEYHRFEENNFCSGSAFVPKQGG 995

Query: 179  RDEDDGWIVCFVHNEETDVSQVHIIDTKNFEGEPVVKLTLPQRVPYGFHGTYV 337
             +EDDGWI+ FVHNE+T++SQVHIID + F+ +PV K+TLPQRVPYGFHGT++
Sbjct: 996  VEEDDGWIISFVHNEDTNISQVHIIDARKFDSKPVAKITLPQRVPYGFHGTFI 1048


>ref|XP_002281310.2| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Vitis vinifera]
          Length = 590

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/113 (60%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   SSAGL-KYGMLAKLYFEELLSRPTETKEHFGSEEIVKVEYHKLEENNFCTGAAFVSKLGG 178
           SS G+ KYG LAKLYFEE         +      ++KVEYH+ EENNFC+G+AFV K GG
Sbjct: 481 SSCGMAKYGGLAKLYFEE---------QDKTLPALIKVEYHRFEENNFCSGSAFVPKQGG 531

Query: 179 RDEDDGWIVCFVHNEETDVSQVHIIDTKNFEGEPVVKLTLPQRVPYGFHGTYV 337
            +EDDGWI+ FVHNE+T++SQVHIID + F+ +PV K+TLPQRVPYGFHGT++
Sbjct: 532 VEEDDGWIISFVHNEDTNISQVHIIDARKFDSKPVAKITLPQRVPYGFHGTFI 584


>emb|CBI20860.3| unnamed protein product [Vitis vinifera]
          Length = 567

 Score =  140 bits (354), Expect = 8e-32
 Identities = 69/114 (60%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   SSAGL-KYGMLAKLYFEELLSRPTETKEHFGSEEIVKVEYHKLEENNFCTGAAFVSKLGG 178
           SS G+ KYG LAKLYFEE  S+    KE  G E ++KVEY++  ENNFC+G+ FV K G 
Sbjct: 451 SSCGMSKYGSLAKLYFEESDSK-LSVKEGKG-EHLIKVEYNRFAENNFCSGSVFVPKGGS 508

Query: 179 RDEDDGWIVCFVHNEETDVSQVHIIDTKNFEGEPVVKLTLPQRVPYGFHGTYVS 340
            +EDD WIV FVHNE+TDVSQVHIID + F  +P+ K+TLPQRVPYGFHG +++
Sbjct: 509 SEEDDSWIVSFVHNEDTDVSQVHIIDAQKFSSKPIAKITLPQRVPYGFHGIFIT 562


>ref|XP_003527837.1| PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like
           [Glycine max]
          Length = 577

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 2/109 (1%)
 Frame = +2

Query: 17  KYGMLAKLYFEELLSR--PTETKEHFGSEEIVKVEYHKLEENNFCTGAAFVSKLGGRDED 190
           KYG LAKLYF E  S     ET++    EE+++VEYH  E N FCTG+AFV K GG +ED
Sbjct: 469 KYGALAKLYFGEPCSEFPVGETQQ----EELIRVEYHTFERNVFCTGSAFVPKEGGIEED 524

Query: 191 DGWIVCFVHNEETDVSQVHIIDTKNFEGEPVVKLTLPQRVPYGFHGTYV 337
           DGWI+ FVHNE+T +SQVHIIDTK F GE V K+T+P RVPYGFHG ++
Sbjct: 525 DGWIITFVHNEDTGISQVHIIDTKKFSGEAVAKITMPFRVPYGFHGAFM 573


Top