BLASTX nr result

ID: Coptis25_contig00042253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042253
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    67   1e-09
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    66   3e-09
ref|XP_003599539.1| Otubain [Medicago truncatula] gi|355488587|g...    62   4e-08
ref|XP_003592137.1| Otubain [Medicago truncatula] gi|355481185|g...    57   1e-06
ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    55   5e-06

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
 Frame = +3

Query: 90  IFTTEEVFHTRSEAIGWATARGRQVNVVVVIEKSECAKGNRVA-RLNLACECSGVYR--- 257
           +FTT+ +  +R   I W    G++  +V++I++++    NR   R+   CE SG YR   
Sbjct: 6   VFTTDAIHPSREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGAYRHTG 65

Query: 258 -SHKKEGEEKANKRRSGTKKSGCPFKLKGIFQRGTVDSW 371
               +EG++K  ++ +GTKK GCPF L+GI +    D W
Sbjct: 66  XDKGEEGKKKRKRKATGTKKCGCPFSLRGI-KLPLADEW 103


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
 Frame = +3

Query: 93  FTTEEVFHTRSEAIGWATARGRQVNVVVVIEKSECA----KGNRVARLNLACECSGVYRS 260
           FTT+EVF TR   + WA A GR+    V+I++S+      +  R   + L CE SG YR 
Sbjct: 504 FTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGCERSGKYRQ 563

Query: 261 HKKEGEEKANKRRSGTKKSGCPFKLKG 341
           +K      A  R++GTKK GCPF+L+G
Sbjct: 564 YK-----DALARKTGTKKCGCPFRLRG 585


>ref|XP_003599539.1| Otubain [Medicago truncatula] gi|355488587|gb|AES69790.1| Otubain
           [Medicago truncatula]
          Length = 217

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/93 (36%), Positives = 49/93 (52%)
 Frame = +3

Query: 93  FTTEEVFHTRSEAIGWATARGRQVNVVVVIEKSECAKGNRVARLNLACECSGVYRSHKKE 272
           FTT   +  R E +GW   +G +    V I+KS   +    + L + CE SG+Y+  K  
Sbjct: 74  FTTNARWREREELLGWVRRQGVRAGFSVCIDKSVLKR----SYLMIQCERSGIYKPPKVR 129

Query: 273 GEEKANKRRSGTKKSGCPFKLKGIFQRGTVDSW 371
             +K N  R G++K  CPF+LKG F + T D W
Sbjct: 130 --KKPNLERIGSRKCNCPFRLKGFFDKDTNDWW 160


>ref|XP_003592137.1| Otubain [Medicago truncatula] gi|355481185|gb|AES62388.1| Otubain
           [Medicago truncatula]
          Length = 541

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/92 (32%), Positives = 51/92 (55%)
 Frame = +3

Query: 81  QQKIFTTEEVFHTRSEAIGWATARGRQVNVVVVIEKSECAKGNRVARLNLACECSGVYRS 260
           Q++ FTT+  F TR++ + W   + R++   +VI KS+ +   R A + L CE  G Y  
Sbjct: 85  QREHFTTKHKFATRNDLLKWVGEKARKLGFSIVIGKSDNSGNGRSAFVTLICERGGSYTE 144

Query: 261 HKKEGEEKANKRRSGTKKSGCPFKLKGIFQRG 356
           +K+    K+ ++  G+ K  CPF+L+G    G
Sbjct: 145 YKR----KSRRQIVGSVKRECPFRLRGYLLAG 172


>ref|XP_003545621.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 388

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = +3

Query: 105 EVFHTRSEAIGWATARGRQVNVVVVIEKSECAKGNR--VARLNLACECSGVYRSHKKEGE 278
           EVF TR + + WA     +   V VI +S+   G+R   + + + CE SG Y   KKE  
Sbjct: 20  EVFATREDVLKWARTVAHENGFVAVIMRSDTYTGSRGRTSFVLIGCERSGKYNGRKKEFV 79

Query: 279 EKANKRRSGTKKSGCPFKLKG 341
               +R +GT+K GCPFK++G
Sbjct: 80  ----RRDTGTRKCGCPFKIRG 96


Top