BLASTX nr result

ID: Coptis25_contig00042243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042243
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254...   115   5e-24
gb|AFK47676.1| unknown [Lotus japonicus]                              112   3e-23
ref|XP_003546807.1| PREDICTED: uncharacterized protein LOC100794...   109   2e-22
ref|XP_003532928.1| PREDICTED: uncharacterized protein LOC100804...   108   6e-22
ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arab...   105   4e-21

>ref|XP_002280962.2| PREDICTED: uncharacterized protein LOC100254596 [Vitis vinifera]
          Length = 335

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/74 (74%), Positives = 61/74 (82%)
 Frame = -2

Query: 259 MRRDLKELKEFPQYFSFSLENRIKPRHLSCVSKGVYLPLPVMLKTSETLFRHRLEVCCSS 80
           M R+L+ELKEFPQYFSFSLENRIKPRH  CV KGV  PLP+MLKT+E  F  RLEVCC+S
Sbjct: 257 MGRELRELKEFPQYFSFSLENRIKPRHQCCVEKGVCFPLPIMLKTTEAKFHGRLEVCCNS 316

Query: 79  SPPLATSPLWWCTS 38
           S PL TSPL WCT+
Sbjct: 317 SGPLRTSPL-WCTN 329


>gb|AFK47676.1| unknown [Lotus japonicus]
          Length = 347

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/76 (72%), Positives = 60/76 (78%)
 Frame = -2

Query: 259 MRRDLKELKEFPQYFSFSLENRIKPRHLSCVSKGVYLPLPVMLKTSETLFRHRLEVCCSS 80
           M RDLKELKEFPQYFSFSLENRIKPRH  CV  GV   LPV+LKTSE  FR+RL++C +S
Sbjct: 271 MGRDLKELKEFPQYFSFSLENRIKPRHKQCVELGVCFTLPVLLKTSEVTFRNRLDLCVNS 330

Query: 79  SPPLATSPLWWCTSTH 32
           S PL TSPL WCT  H
Sbjct: 331 STPLETSPL-WCTGFH 345


>ref|XP_003546807.1| PREDICTED: uncharacterized protein LOC100794678 [Glycine max]
          Length = 340

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/70 (74%), Positives = 56/70 (80%)
 Frame = -2

Query: 259 MRRDLKELKEFPQYFSFSLENRIKPRHLSCVSKGVYLPLPVMLKTSETLFRHRLEVCCSS 80
           M RDLKELKEFPQYFSFSLENRIKPRH  CV  GV  PLP +LKTSE  F+ RL+VC +S
Sbjct: 262 MGRDLKELKEFPQYFSFSLENRIKPRHKQCVEMGVCFPLPALLKTSEVKFQSRLDVCVNS 321

Query: 79  SPPLATSPLW 50
           S PL TSPLW
Sbjct: 322 STPLKTSPLW 331


>ref|XP_003532928.1| PREDICTED: uncharacterized protein LOC100804440 [Glycine max]
          Length = 338

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/70 (72%), Positives = 56/70 (80%)
 Frame = -2

Query: 259 MRRDLKELKEFPQYFSFSLENRIKPRHLSCVSKGVYLPLPVMLKTSETLFRHRLEVCCSS 80
           M RDLKELKEFPQYFSFSLENRI+PRH  CV  GV  PLP +LKTSE  F+ RL+VC +S
Sbjct: 260 MGRDLKELKEFPQYFSFSLENRIEPRHKQCVEMGVCFPLPALLKTSEVKFQSRLDVCVNS 319

Query: 79  SPPLATSPLW 50
           S PL TSPLW
Sbjct: 320 STPLKTSPLW 329


>ref|XP_002862184.1| hypothetical protein ARALYDRAFT_497554 [Arabidopsis lyrata subsp.
           lyrata] gi|297823411|ref|XP_002879588.1| hypothetical
           protein ARALYDRAFT_482571 [Arabidopsis lyrata subsp.
           lyrata] gi|297307418|gb|EFH38442.1| hypothetical protein
           ARALYDRAFT_497554 [Arabidopsis lyrata subsp. lyrata]
           gi|297325427|gb|EFH55847.1| hypothetical protein
           ARALYDRAFT_482571 [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = -2

Query: 259 MRRDLKELKEFPQYFSFSLENRIKPRHLSCVSKGVYLPLPVMLKTSETLFRHRLEVCCSS 80
           M RD++E+ EFPQYFSFSLENRIKPRH +C +KGV  PLPVMLKT+E  FR  LEVCC S
Sbjct: 253 MERDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTLEVCCDS 312

Query: 79  SPPLATSPL 53
           SPPL TS L
Sbjct: 313 SPPLKTSRL 321


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