BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042230
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...   100   1e-19
emb|CAN81979.1| hypothetical protein VITISV_032721 [Vitis vinifera]    96   2e-18
emb|CAN61804.1| hypothetical protein VITISV_044085 [Vitis vinifera]    96   2e-18
emb|CAN75942.1| hypothetical protein VITISV_016459 [Vitis vinifera]    96   2e-18
emb|CAN61597.1| hypothetical protein VITISV_013023 [Vitis vinifera]    96   3e-18

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
 Frame = +3

Query: 30   NDSVLAREVDLLEERRDLAAIKVASYQQILNRSYNKRVHPRSFQPGDLVLKKT------Q 191
            ND +L   +D LEE+RD A +++ +YQQ   + YNK+V  R F  GDLVL+K       Q
Sbjct: 1680 NDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQ 1739

Query: 192  DDSKLAATWEGPYIVERVVSNGAYWIKTQEGKALPRPWNTYLLKRFY 332
            D  KL A WEGPY++ +VV  G Y + T +G  +PR WN+  LKR+Y
Sbjct: 1740 DAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>emb|CAN81979.1| hypothetical protein VITISV_032721 [Vitis vinifera]
          Length = 961

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/117 (41%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
 Frame = +3

Query: 3    RSELVESGHNDSVLAREVDLLEERRDLAAIKVASYQQILNRSYNKRVHPRSFQPGDLVLK 182
            R++  +    +  L R +D  +E R+ AAI++A YQQ  +  YN++V PR+F+ G LVL+
Sbjct: 845  RTDAAKQSDANMELGRNLDWTDEVRESAAIRMADYQQRASAHYNRKVRPRAFKNGTLVLR 904

Query: 183  KTQDDS------KLAATWEGPYIVERVVSNGAYWIKTQEGKALPRPWNTYLLKRFYQ 335
            K  +++      K  A WEGPYIV +  SNGAY ++  +G +L RPWN   LK++YQ
Sbjct: 905  KVFENTTEVGAGKFQANWEGPYIVSKASSNGAYHLQKLDGTSLLRPWNVSNLKQYYQ 961


>emb|CAN61804.1| hypothetical protein VITISV_044085 [Vitis vinifera]
          Length = 1028

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
 Frame = +3

Query: 3    RSELVESGHNDSVLAREVDLLEERRDLAAIKVASYQQILNRSYNKRVHPRSFQPGDLVLK 182
            R++  +    D+ L R +D  +E R+ A+I++A YQQ  +  YN++V PR+F+ G LVL+
Sbjct: 912  RTDAAKQKDADTELGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRNFKNGTLVLR 971

Query: 183  KTQDDS------KLAATWEGPYIVERVVSNGAYWIKTQEGKALPRPWNTYLLKRFYQ 335
            K  +++      K  A WEGPYIV +   NGAY ++  +G  L RPWN + LK++YQ
Sbjct: 972  KVFENTAEVGAGKFQANWEGPYIVSKANENGAYHLQKLDGTPLLRPWNVFNLKQYYQ 1028


>emb|CAN75942.1| hypothetical protein VITISV_016459 [Vitis vinifera]
          Length = 1027

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
 Frame = +3

Query: 3    RSELVESGHNDSVLAREVDLLEERRDLAAIKVASYQQILNRSYNKRVHPRSFQPGDLVLK 182
            R++  +    D+ L R +D  +E R+ A+I++A YQQ  +  YN++V PR+F+ G LVL+
Sbjct: 911  RTDAAKQKDADTELGRNLDWADEVRESASIRMADYQQRASAHYNRKVRPRNFKNGTLVLR 970

Query: 183  KTQDDS------KLAATWEGPYIVERVVSNGAYWIKTQEGKALPRPWNTYLLKRFYQ 335
            K  +++      K  A WEGPYIV +   NGAY ++  +G  L RPWN + LK++YQ
Sbjct: 971  KVFENTAEVGAGKFQANWEGPYIVSKANENGAYHLQKLDGTPLLRPWNVFNLKQYYQ 1027


>emb|CAN61597.1| hypothetical protein VITISV_013023 [Vitis vinifera]
          Length = 1027

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = +3

Query: 3    RSELVESGHNDSVLAREVDLLEERRDLAAIKVASYQQILNRSYNKRVHPRSFQPGDLVLK 182
            R++  +    +  L R +D  +E R+ AAI++A YQQ  +  YN++V PRSF+ G LVL+
Sbjct: 911  RTBAAKQSDANMELGRNLDWTDEVRESAAIRMADYQQRASAHYNRKVRPRSFKNGTLVLR 970

Query: 183  KTQDDS------KLAATWEGPYIVERVVSNGAYWIKTQEGKALPRPWNTYLLKRFYQ 335
            K  + +      K  A WEGPYIV +  SNGAY ++  +G  L RPWN   LK++YQ
Sbjct: 971  KVFESTTEVGARKFQANWEGPYIVSKASSNGAYHLQKLDGTPLLRPWNVSNLKQYYQ 1027