BLASTX nr result

ID: Coptis25_contig00042211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042211
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81578.1| hypothetical protein VITISV_023184 [Vitis vinifera]    62   6e-08
ref|NP_001172703.1| Os01g0909900 [Oryza sativa Japonica Group] g...    50   1e-07
gb|EEC72006.1| hypothetical protein OsI_04870 [Oryza sativa Indi...    50   1e-07
dbj|BAD82332.1| hypothetical protein [Oryza sativa Japonica Group]     50   1e-07
ref|XP_002466652.1| hypothetical protein SORBIDRAFT_01g011690 [S...    47   1e-06

>emb|CAN81578.1| hypothetical protein VITISV_023184 [Vitis vinifera]
          Length = 728

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 174 ESYKKNETVRSGVTIFATSFLTLQSLMDKKEKLKTMFTSDEWGECKWSKIAKRK 13
           E  K+ E VRSG+T FAT FLTLQS+  +K  L+ MFTSD+W   KW+K AK K
Sbjct: 381 EFTKQRELVRSGITRFATCFLTLQSIHMQKRNLRLMFTSDKWLASKWAKEAKGK 434


>ref|NP_001172703.1| Os01g0909900 [Oryza sativa Japonica Group]
           gi|255673984|dbj|BAH91433.1| Os01g0909900 [Oryza sativa
           Japonica Group]
          Length = 307

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = -1

Query: 165 KKNETVRSGVTIFATSFLTLQSLMDKKEKLKTMFTSDEW 49
           KK +T+R GVT FA +FLTLQSL++KK +L+ M  S EW
Sbjct: 107 KKRDTIRPGVTRFALAFLTLQSLIEKKRELRAMALSVEW 145



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 209 IYSHHKTLSMTRKATKK 159
           +YSHHKTL++ RK TKK
Sbjct: 92  VYSHHKTLALMRKHTKK 108


>gb|EEC72006.1| hypothetical protein OsI_04870 [Oryza sativa Indica Group]
           gi|222619728|gb|EEE55860.1| hypothetical protein
           OsJ_04491 [Oryza sativa Japonica Group]
          Length = 243

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = -1

Query: 165 KKNETVRSGVTIFATSFLTLQSLMDKKEKLKTMFTSDEW 49
           KK +T+R GVT FA +FLTLQSL++KK +L+ M  S EW
Sbjct: 37  KKRDTIRPGVTRFALAFLTLQSLIEKKRELRAMALSVEW 75



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 209 IYSHHKTLSMTRKATKK 159
           +YSHHKTL++ RK TKK
Sbjct: 22  VYSHHKTLALMRKHTKK 38


>dbj|BAD82332.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 221

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 23/39 (58%), Positives = 30/39 (76%)
 Frame = -1

Query: 165 KKNETVRSGVTIFATSFLTLQSLMDKKEKLKTMFTSDEW 49
           KK +T+R GVT FA +FLTLQSL++KK +L+ M  S EW
Sbjct: 37  KKRDTIRPGVTRFALAFLTLQSLIEKKRELRAMALSVEW 75



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -2

Query: 209 IYSHHKTLSMTRKATKK 159
           +YSHHKTL++ RK TKK
Sbjct: 22  VYSHHKTLALMRKHTKK 38


>ref|XP_002466652.1| hypothetical protein SORBIDRAFT_01g011690 [Sorghum bicolor]
           gi|241920506|gb|EER93650.1| hypothetical protein
           SORBIDRAFT_01g011690 [Sorghum bicolor]
          Length = 577

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = -1

Query: 156 ETVRSGVTIFATSFLTLQSLMDKKEKLKTMFTSDEWGECKWSKIAKRKMA 7
           E VR GVT FA++FLTL+S+ +KK+KL+ M     W   K  K  K K A
Sbjct: 388 EIVRPGVTRFASNFLTLESIQEKKDKLRKMVVHSRWDSLKDVKSKKGKNA 437



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 230 AKAFTIFIYSHHKTLSMTRKATK 162
           AKAFTIF+Y H +TL   R  T+
Sbjct: 363 AKAFTIFVYGHTRTLECMRHFTE 385


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