BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042186
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    62   9e-16
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    46   1e-10
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    46   4e-10
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    47   4e-10
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    46   4e-10

>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 62.0 bits (149), Expect(2) = 9e-16
 Identities = 32/76 (42%), Positives = 50/76 (65%)
 Frame = -1

Query: 331 SKVEDVGLNINSYFKNIFSSDEALFNNDILDLFKPCITPNENILLTRIPTDDEIWVTIKS 152
           SK E++G    S+F+++++ DE+L   ++L++F+P IT   N +LT+  TD+EI   +  
Sbjct: 632 SKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDALFQ 691

Query: 151 IGALKAFGPDGFQGIF 104
           IG LKA GPDGF   F
Sbjct: 692 IGPLKAPGPDGFPARF 707



 Score = 46.2 bits (108), Expect(2) = 9e-16
 Identities = 20/46 (43%), Positives = 31/46 (67%)
 Frame = -2

Query: 477 KEASFWKQKTT*N*VKDAGRNTRYFYLSTIYRRRKNSIEKLKNDNG 340
           +E  +WKQ++    +K+  RNTRYF+L   +R RKN I+KL+  +G
Sbjct: 583 REEIWWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDG 628


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 46.2 bits (108), Expect(2) = 1e-10
 Identities = 20/49 (40%), Positives = 33/49 (67%)
 Frame = -2

Query: 477 KEASFWKQKTT*N*VKDAGRNTRYFYLSTIYRRRKNSIEKLKNDNGAGT 331
           +E  +WKQ++    +K+   NTRYF+L   +R +KN I+KLK ++G+ T
Sbjct: 291 REEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTT 339



 Score = 44.7 bits (104), Expect(2) = 1e-10
 Identities = 25/66 (37%), Positives = 39/66 (59%)
 Frame = -1

Query: 298 SYFKNIFSSDEALFNNDILDLFKPCITPNENILLTRIPTDDEIWVTIKSIGALKAFGPDG 119
           S+F+ +++ D+ L   ++L++F   I+   N  L +  TD+EI   +  IG LKA GPDG
Sbjct: 351 SFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTDEEISDALFQIGPLKAPGPDG 410

Query: 118 FQGIFL 101
           F   FL
Sbjct: 411 FPARFL 416


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 20/49 (40%), Positives = 33/49 (67%)
 Frame = -2

Query: 477 KEASFWKQKTT*N*VKDAGRNTRYFYLSTIYRRRKNSIEKLKNDNGAGT 331
           +E  +WKQ++    +K+   NTRYF+L   +R +KN I+KLK ++G+ T
Sbjct: 316 REEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTT 364



 Score = 42.7 bits (99), Expect(2) = 4e-10
 Identities = 24/66 (36%), Positives = 39/66 (59%)
 Frame = -1

Query: 298 SYFKNIFSSDEALFNNDILDLFKPCITPNENILLTRIPTDDEIWVTIKSIGALKAFGPDG 119
           S+F+ +++ D+ L   ++L++F   I+   N  L +  T++EI   +  IG LKA GPDG
Sbjct: 376 SFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQIGPLKAPGPDG 435

Query: 118 FQGIFL 101
           F   FL
Sbjct: 436 FPARFL 441


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 47.4 bits (111), Expect(2) = 4e-10
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = -2

Query: 474 EASFWKQKTT*N*VKDAGRNTRYFYLSTIYRRRKNSIEKLKNDNG 340
           E + W QK+    + D  RNTRYF+LST+ RR +N I+ L+N++G
Sbjct: 338 EETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDMLQNNDG 382



 Score = 41.6 bits (96), Expect(2) = 4e-10
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
 Frame = -1

Query: 337 WDSKVEDVGLNINSYFKNIFSSDEALFNNDILDL-FKPCITPNENILLTRIPTDDEIWVT 161
           W S   +V   +  Y+K++FS D    N   L   F P IT ++   + R  ++ E+ + 
Sbjct: 384 WISNPMEVKAMVLGYWKHLFSEDSVQSNFCHLPRDFFPQITADDFEKMMRPLSEVEVTLA 443

Query: 160 IKSIGALKAFGPDGFQGIF 104
           +KS+   KA GPDGFQ +F
Sbjct: 444 LKSMKPFKAPGPDGFQPLF 462


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 46.2 bits (108), Expect(2) = 4e-10
 Identities = 20/49 (40%), Positives = 33/49 (67%)
 Frame = -2

Query: 477 KEASFWKQKTT*N*VKDAGRNTRYFYLSTIYRRRKNSIEKLKNDNGAGT 331
           +E  +WKQ++    +K+   NTRYF+L   +R +KN I+KLK ++G+ T
Sbjct: 97  REEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDGSTT 145



 Score = 42.7 bits (99), Expect(2) = 4e-10
 Identities = 24/66 (36%), Positives = 39/66 (59%)
 Frame = -1

Query: 298 SYFKNIFSSDEALFNNDILDLFKPCITPNENILLTRIPTDDEIWVTIKSIGALKAFGPDG 119
           S+F+ +++ D+ L   ++L++F   I+   N  L +  T++EI   +  IG LKA GPDG
Sbjct: 157 SFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDALFQIGPLKAPGPDG 216

Query: 118 FQGIFL 101
           F   FL
Sbjct: 217 FPARFL 222