BLASTX nr result

ID: Coptis25_contig00042168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042168
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
ref|XP_002302871.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase ...   163   1e-38
emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]   163   1e-38

>ref|XP_002317125.1| predicted protein [Populus trichocarpa] gi|222860190|gb|EEE97737.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  184 bits (466), Expect = 8e-45
 Identities = 87/128 (67%), Positives = 104/128 (81%)
 Frame = -1

Query: 387 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 208
           MDWTRG +IGHG+SATVS+ KA+RS +VFAVKS EL KS+ LQREQ ILS+++CPQIV Y
Sbjct: 1   MDWTRGRTIGHGSSATVSMAKANRSGQVFAVKSAELLKSESLQREQSILSTLKCPQIVVY 60

Query: 207 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 28
            GCD+TNE+G   YNLF+EY+SGG L D+I+  GGCLDE  IR + R IL GL+YLH N 
Sbjct: 61  KGCDITNENGKLFYNLFLEYISGGTLIDAIREGGGCLDEAMIRLYARTILLGLEYLHCNG 120

Query: 27  IVHCDIKG 4
           IVHCDIKG
Sbjct: 121 IVHCDIKG 128


>ref|XP_002331541.1| predicted protein [Populus trichocarpa] gi|222873765|gb|EEF10896.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  178 bits (452), Expect = 4e-43
 Identities = 84/128 (65%), Positives = 104/128 (81%)
 Frame = -1

Query: 387 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 208
           MDWTRG +IG G+SATVS+ +A++S +VFAVKS ELSKS+ LQ+EQ +LS++RCPQIV Y
Sbjct: 1   MDWTRGQTIGRGSSATVSMARANQSGKVFAVKSAELSKSESLQKEQIVLSTLRCPQIVAY 60

Query: 207 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 28
            GCD+TNE+G  +YNLF+EY SGG L D+I+  GGCLDE  IR + R IL GL+YLH N 
Sbjct: 61  KGCDITNENGKVLYNLFLEYASGGTLIDAIREGGGCLDEDMIRLYARTILLGLEYLHCNG 120

Query: 27  IVHCDIKG 4
           IVHCDIKG
Sbjct: 121 IVHCDIKG 128


>ref|XP_002302871.1| predicted protein [Populus trichocarpa] gi|222844597|gb|EEE82144.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  166 bits (419), Expect = 2e-39
 Identities = 78/127 (61%), Positives = 100/127 (78%)
 Frame = -1

Query: 387 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 208
           MDWTRGHSIGHG++ATVS+  + +S +VFAVKSVEL +S FLQREQ+ILSS+  P IV Y
Sbjct: 2   MDWTRGHSIGHGSTATVSLATSIQSGDVFAVKSVELFQSGFLQREQQILSSLTSPFIVSY 61

Query: 207 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 28
            GCD+T E+   MYNLF+EY+  G LS++I + GG LDE  IR++T  +L GLDY+H+N 
Sbjct: 62  RGCDITRENSKVMYNLFLEYMPNGTLSNAIHAHGGRLDEPLIRNYTSQVLQGLDYIHLNG 121

Query: 27  IVHCDIK 7
           +VHCDIK
Sbjct: 122 LVHCDIK 128


>ref|XP_002269660.1| PREDICTED: mitogen-activated protein kinase kinase kinase A [Vitis
           vinifera] gi|297739169|emb|CBI28820.3| unnamed protein
           product [Vitis vinifera]
          Length = 420

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/129 (60%), Positives = 99/129 (76%)
 Frame = -1

Query: 387 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 208
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVGY
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 207 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 28
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I+ GLDY+H   
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQIVQGLDYIHSRG 120

Query: 27  IVHCDIKGK 1
           +VHCDIKG+
Sbjct: 121 LVHCDIKGQ 129


>emb|CAN65217.1| hypothetical protein VITISV_024689 [Vitis vinifera]
          Length = 420

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/129 (60%), Positives = 99/129 (76%)
 Frame = -1

Query: 387 MDWTRGHSIGHGASATVSVGKAHRSNEVFAVKSVELSKSDFLQREQRILSSVRCPQIVGY 208
           MDWTRGH++G G+SATVS+  + RS +VFAVKSVELS+S+ LQRE+RILSS+R P IVGY
Sbjct: 1   MDWTRGHTLGSGSSATVSLANSLRSGDVFAVKSVELSRSESLQREERILSSLRSPYIVGY 60

Query: 207 LGCDVTNESGTYMYNLFMEYVSGGALSDSIQSQGGCLDECAIRSHTRDILHGLDYLHMNQ 28
            GCD+T E+   MYNLF+EY+ GG L D+I+  GG L E  I  + R I+ GLDY+H   
Sbjct: 61  KGCDITRENKKLMYNLFIEYMPGGTLGDAIRRGGGQLHESMIGIYARQIVQGLDYIHSRG 120

Query: 27  IVHCDIKGK 1
           +VHCDIKG+
Sbjct: 121 LVHCDIKGQ 129


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