BLASTX nr result
ID: Coptis25_contig00042142
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042142 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl... 142 2e-32 emb|CBI27426.3| unnamed protein product [Vitis vinifera] 142 2e-32 ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30 ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6... 133 1e-29 ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl... 133 1e-29 >ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis vinifera] Length = 610 Score = 142 bits (359), Expect = 2e-32 Identities = 64/88 (72%), Positives = 78/88 (88%) Frame = +3 Query: 3 GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182 GNDY VGNMI+DA+ QVGR GV+TIEKGK ENS+Q+VEGMQFDRGYLS YF+TDR+KM+ Sbjct: 179 GNDYTVGNMISDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMM 238 Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266 VE+H CK+LL DKK+ +PK+ F+ILDNA Sbjct: 239 VEFHDCKLLLVDKKITNPKEMFKILDNA 266 >emb|CBI27426.3| unnamed protein product [Vitis vinifera] Length = 584 Score = 142 bits (359), Expect = 2e-32 Identities = 64/88 (72%), Positives = 78/88 (88%) Frame = +3 Query: 3 GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182 GNDY VGNMI+DA+ QVGR GV+TIEKGK ENS+Q+VEGMQFDRGYLS YF+TDR+KM+ Sbjct: 153 GNDYTVGNMISDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMM 212 Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266 VE+H CK+LL DKK+ +PK+ F+ILDNA Sbjct: 213 VEFHDCKLLLVDKKITNPKEMFKILDNA 240 >ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1| predicted protein [Populus trichocarpa] Length = 475 Score = 135 bits (341), Expect = 3e-30 Identities = 62/88 (70%), Positives = 78/88 (88%) Frame = +3 Query: 3 GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182 GNDY VGNMI+DAL QVGR GVVTIEKG+ TEN +++VEGMQFDRGYLS YF+TDR++M+ Sbjct: 131 GNDYTVGNMISDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDRQRMV 190 Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266 VE+H+CK+LL DKK+ + K+ F+ILDNA Sbjct: 191 VEFHNCKLLLVDKKIQNAKEVFKILDNA 218 >ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 133 bits (335), Expect = 1e-29 Identities = 60/88 (68%), Positives = 76/88 (86%) Frame = +3 Query: 3 GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182 GNDY VG++++DA QVG +GVV IEKGKS +NS+Q+VEGMQFDRGYLS YF+TDR+KM+ Sbjct: 200 GNDYAVGSLVSDAFRQVGWKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMV 259 Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266 VE+H CK+LL DKK+ PK+ F+ILDNA Sbjct: 260 VEFHECKLLLVDKKISDPKEMFKILDNA 287 >ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Cucumis sativus] Length = 597 Score = 133 bits (335), Expect = 1e-29 Identities = 60/88 (68%), Positives = 76/88 (86%) Frame = +3 Query: 3 GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182 GNDY VG++++DA QVG +GVV IEKGKS +NS+Q+VEGMQFDRGYLS YF+TDR+KM+ Sbjct: 200 GNDYAVGSLVSDAFRQVGWKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMV 259 Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266 VE+H CK+LL DKK+ PK+ F+ILDNA Sbjct: 260 VEFHECKLLLVDKKISDPKEMFKILDNA 287