BLASTX nr result

ID: Coptis25_contig00042142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042142
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   142   2e-32
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   133   1e-29
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...   133   1e-29

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/88 (72%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182
           GNDY VGNMI+DA+ QVGR GV+TIEKGK  ENS+Q+VEGMQFDRGYLS YF+TDR+KM+
Sbjct: 179 GNDYTVGNMISDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMM 238

Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266
           VE+H CK+LL DKK+ +PK+ F+ILDNA
Sbjct: 239 VEFHDCKLLLVDKKITNPKEMFKILDNA 266


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/88 (72%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182
           GNDY VGNMI+DA+ QVGR GV+TIEKGK  ENS+Q+VEGMQFDRGYLS YF+TDR+KM+
Sbjct: 153 GNDYTVGNMISDAIRQVGRRGVITIEKGKCAENSLQIVEGMQFDRGYLSPYFVTDRQKMM 212

Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266
           VE+H CK+LL DKK+ +PK+ F+ILDNA
Sbjct: 213 VEFHDCKLLLVDKKITNPKEMFKILDNA 240


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/88 (70%), Positives = 78/88 (88%)
 Frame = +3

Query: 3   GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182
           GNDY VGNMI+DAL QVGR GVVTIEKG+ TEN +++VEGMQFDRGYLS YF+TDR++M+
Sbjct: 131 GNDYTVGNMISDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDRQRMV 190

Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266
           VE+H+CK+LL DKK+ + K+ F+ILDNA
Sbjct: 191 VEFHNCKLLLVDKKIQNAKEVFKILDNA 218


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/88 (68%), Positives = 76/88 (86%)
 Frame = +3

Query: 3   GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182
           GNDY VG++++DA  QVG +GVV IEKGKS +NS+Q+VEGMQFDRGYLS YF+TDR+KM+
Sbjct: 200 GNDYAVGSLVSDAFRQVGWKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMV 259

Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266
           VE+H CK+LL DKK+  PK+ F+ILDNA
Sbjct: 260 VEFHECKLLLVDKKISDPKEMFKILDNA 287


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Cucumis sativus]
          Length = 597

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/88 (68%), Positives = 76/88 (86%)
 Frame = +3

Query: 3   GNDYVVGNMIADALCQVGREGVVTIEKGKSTENSMQVVEGMQFDRGYLSHYFITDRKKML 182
           GNDY VG++++DA  QVG +GVV IEKGKS +NS+Q+VEGMQFDRGYLS YF+TDR+KM+
Sbjct: 200 GNDYAVGSLVSDAFRQVGWKGVVQIEKGKSVDNSLQIVEGMQFDRGYLSPYFVTDRRKMV 259

Query: 183 VEYHSCKILLGDKKVIHPKDFFRILDNA 266
           VE+H CK+LL DKK+  PK+ F+ILDNA
Sbjct: 260 VEFHECKLLLVDKKISDPKEMFKILDNA 287


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