BLASTX nr result

ID: Coptis25_contig00042140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042140
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147834.1| PREDICTED: auxin-induced protein 6B-like [Cu...    74   1e-11
emb|CAN60527.1| hypothetical protein VITISV_000524 [Vitis vinifera]    73   3e-11
ref|XP_002277332.1| PREDICTED: auxin-induced protein 6B-like [Vi...    72   5e-11
ref|XP_002510511.1| Auxin-induced protein 6B, putative [Ricinus ...    68   7e-10
ref|XP_003549458.1| PREDICTED: auxin-induced protein 6B-like [Gl...    65   7e-09

>ref|XP_004147834.1| PREDICTED: auxin-induced protein 6B-like [Cucumis sativus]
           gi|449519840|ref|XP_004166942.1| PREDICTED:
           auxin-induced protein 6B-like [Cucumis sativus]
          Length = 150

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/47 (68%), Positives = 36/47 (76%)
 Frame = -1

Query: 277 SESSNSARFANFEDFQRYCHVGLRTNLDFWPESRPLLLHGLTENTIW 137
           SES NS RF   +DFQ YCH+G+RT LD WPESRP LLHGL E +IW
Sbjct: 105 SESPNSGRFVKLDDFQSYCHIGIRTGLDLWPESRP-LLHGLAEKSIW 150


>emb|CAN60527.1| hypothetical protein VITISV_000524 [Vitis vinifera]
          Length = 200

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/54 (62%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -1

Query: 277 SESSNSARFANFEDFQRYCHVGLRTNLDFWPESRPLLLH-GLTENTIW*VNRSW 119
           SE+SNSARF N EDFQRYCHVG+R++LDFWPESRPLL     T   +W  +  W
Sbjct: 109 SEASNSARFVNREDFQRYCHVGIRSSLDFWPESRPLLHRVCFTPKNVWRWHIGW 162


>ref|XP_002277332.1| PREDICTED: auxin-induced protein 6B-like [Vitis vinifera]
          Length = 151

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -1

Query: 277 SESSNSARFANFEDFQRYCHVGLRTNLDFWPESRPLL 167
           SE+SNSARF N EDFQRYCHVG+R++LDFWPESRPLL
Sbjct: 109 SEASNSARFVNREDFQRYCHVGIRSSLDFWPESRPLL 145


>ref|XP_002510511.1| Auxin-induced protein 6B, putative [Ricinus communis]
           gi|223551212|gb|EEF52698.1| Auxin-induced protein 6B,
           putative [Ricinus communis]
          Length = 151

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
 Frame = -1

Query: 277 SESSNSARFANFEDFQRYCHVGLRTN-LDFWPESRPLLLHGLTENTIW 137
           SES NS R  N EDFQRYCHVG+R++ LDFW ESRP LL+GL + TIW
Sbjct: 105 SESGNSTRLFNLEDFQRYCHVGVRSSKLDFWTESRP-LLNGLADKTIW 151


>ref|XP_003549458.1| PREDICTED: auxin-induced protein 6B-like [Glycine max]
          Length = 151

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/50 (66%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
 Frame = -1

Query: 277 SESSNSARFANFE--DFQR-YCHVGLRTNLDFWPESRPLLLHGLTENTIW 137
           S+ + S RF N E  DFQR YCHVG+  NLDFWPESRP LLHG T+ TIW
Sbjct: 103 SDPAKSNRFLNLELDDFQRHYCHVGISNNLDFWPESRP-LLHGPTDKTIW 151


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