BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042136
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29194.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containi...   132   2e-29
ref|XP_002867948.1| pentatricopeptide repeat-containing protein ...   131   6e-29
ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]        128   5e-28

>emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/103 (65%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   WNSMISAYGFHGQGKEAIKLFSEMCESGTSPTKSTFISLLSACSHSGLL-EGRLYYELMS 179
           WNSMISA+GFH  G +AI+LF EM E GT PTKSTFISLLSACSHSGL+ EG  YY  M 
Sbjct: 668 WNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNML 727

Query: 180 TEFGVEPTIEHHVCYADMLGRSGKLSEAYEFIKDIQPQQQAGV 308
             F VE   EHHVC  DMLGR+G+L EAYEFI+ +  Q + GV
Sbjct: 728 ELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGV 770


>ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/103 (65%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   WNSMISAYGFHGQGKEAIKLFSEMCESGTSPTKSTFISLLSACSHSGLL-EGRLYYELMS 179
           WNSMISA+GFH  G +AI+LF EM E GT PTKSTFISLLSACSHSGL+ EG  YY  M 
Sbjct: 649 WNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNML 708

Query: 180 TEFGVEPTIEHHVCYADMLGRSGKLSEAYEFIKDIQPQQQAGV 308
             F VE   EHHVC  DMLGR+G+L EAYEFI+ +  Q + GV
Sbjct: 709 ELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGV 751


>ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313784|gb|EFH44207.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 919

 Score =  131 bits (329), Expect = 6e-29
 Identities = 67/105 (63%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
 Frame = +3

Query: 3    WNSMISAYGFHGQGKEAIKLFSEMCE--SGTSPTKSTFISLLSACSHSGLL-EGRLYYEL 173
            WNS+ISAYGFHG G++A++LF EM    SG  P KSTFISLLSACSHSG + EG  YY  
Sbjct: 738  WNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQ 797

Query: 174  MSTEFGVEPTIEHHVCYADMLGRSGKLSEAYEFIKDIQPQQQAGV 308
            M  +FGV+P  EH VC  DMLGR+GKL EAYEFI  I   Q+AGV
Sbjct: 798  MEEKFGVKPVTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQKAGV 842


>ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
            mitochondrial-like [Glycine max]
          Length = 944

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = +3

Query: 3    WNSMISAYGFHGQGKEAIKLFSEMCESGTSPTKSTFISLLSACSHSGLL-EGRLYYELMS 179
            WNSMISAYG+HG+G++AIKLF EMCESG   +KSTF+SLLSACSHSGL+ +G  +YE M 
Sbjct: 769  WNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECML 828

Query: 180  TEFGVEPTIEHHVCYADMLGRSGKLSEAYEFIK 278
              +GV+P  EH V   DMLGRSG+L EAYEF K
Sbjct: 829  ERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAK 861


>gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/103 (59%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3    WNSMISAYGFHGQGKEAIKLFSEMCESGTSPTKSTFISLLSACSHSGLL-EGRLYYELMS 179
            WNS+ISA+GFHG G ++I LF +M +SG   TKSTFI+LLSACSHSGL+ EG  YY LMS
Sbjct: 742  WNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLMS 801

Query: 180  TEFGVEPTIEHHVCYADMLGRSGKLSEAYEFIKDIQPQQQAGV 308
             +FG+ P  EHHVC  DMLGR+G+L EA++F++ +  QQ  G+
Sbjct: 802  EKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQTHGI 844