BLASTX nr result

ID: Coptis25_contig00042096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042096
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]    74   1e-23
emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]    72   3e-23
emb|CAN82314.1| hypothetical protein VITISV_015643 [Vitis vinifera]    71   7e-23
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]    71   6e-22
emb|CAN77377.1| hypothetical protein VITISV_020255 [Vitis vinifera]    65   4e-21

>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
          Length = 1306

 Score = 73.6 bits (179), Expect(3) = 1e-23
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -3

Query: 316 LSWQFDAEIHLQSKKLGDAIKEGNKMSPEENAISLIFLRHHIHDDLKNEYLIEEHPAGLW 137
           LSW  DAE+HL +  LG  IK+GN+ S ++ A +LIFLRHH+H+ LKNEYL  + P  LW
Sbjct: 20  LSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHEGLKNEYLTVKDPFTLW 79



 Score = 42.7 bits (99), Expect(3) = 1e-23
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  MLKVNGSTFHASNVLLQQ*YRERRFSKF 3
           ML+   +TFHASNVLLQQ YRERRF+K+
Sbjct: 138 MLEKTFTTFHASNVLLQQQYRERRFTKY 165



 Score = 38.5 bits (88), Expect(3) = 1e-23
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -1

Query: 135 NSMKDRYDHQKMVILPNAQSEWLNL 61
           +++K+RYDHQK VILP A+ +W++L
Sbjct: 80  SNLKERYDHQKTVILPKARYDWMHL 104


>emb|CAN77974.1| hypothetical protein VITISV_006175 [Vitis vinifera]
          Length = 1501

 Score = 72.0 bits (175), Expect(3) = 3e-23
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -3

Query: 316 LSWQFDAEIHLQSKKLGDAIKEGNKMSPEENAISLIFLRHHIHDDLKNEYLIEEHPAGLW 137
           LSW  DAE+HL +  LG  IK+GN+ S ++ A +LIFLRHH+H+ LKNEY   + P  LW
Sbjct: 20  LSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHHLHEGLKNEYFTVKDPFTLW 79



 Score = 42.7 bits (99), Expect(3) = 3e-23
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  MLKVNGSTFHASNVLLQQ*YRERRFSKF 3
           ML+   +TFHASNVLLQQ YRERRF+K+
Sbjct: 138 MLEKTFTTFHASNVLLQQQYRERRFTKY 165



 Score = 38.5 bits (88), Expect(3) = 3e-23
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -1

Query: 135 NSMKDRYDHQKMVILPNAQSEWLNL 61
           +++K+RYDHQK VILP A+ +W++L
Sbjct: 80  SNLKERYDHQKTVILPKARYDWMHL 104


>emb|CAN82314.1| hypothetical protein VITISV_015643 [Vitis vinifera]
          Length = 330

 Score = 70.9 bits (172), Expect(3) = 7e-23
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -3

Query: 316 LSWQFDAEIHLQSKKLGDAIKEGNKMSPEENAISLIFLRHHIHDDLKNEYLIEEHPAGLW 137
           LSW  DAE+HL +  L   IK+GN+ S ++ A +LIFLRHH+H+ LKNEYL  + P  LW
Sbjct: 20  LSWILDAELHLDAMNLXATIKQGNQASLQDRAKALIFLRHHLHEGLKNEYLTVKDPFTLW 79



 Score = 42.7 bits (99), Expect(3) = 7e-23
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  MLKVNGSTFHASNVLLQQ*YRERRFSKF 3
           ML+   +TFHASNVLLQQ YRERRF+K+
Sbjct: 138 MLEKTFTTFHASNVLLQQQYRERRFTKY 165



 Score = 38.5 bits (88), Expect(3) = 7e-23
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -1

Query: 135 NSMKDRYDHQKMVILPNAQSEWLNL 61
           +++K+RYDHQK VILP A+ +W++L
Sbjct: 80  SNLKERYDHQKTVILPKARYDWMHL 104


>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
          Length = 1496

 Score = 70.9 bits (172), Expect(3) = 6e-22
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -3

Query: 316 LSWQFDAEIHLQSKKLGDAIKEGNKMSPEENAISLIFLRHHIHDDLKNEYLIEEHPAGLW 137
           LSW  DAE+HL +  LG  IK+GN+ S ++ A +LIFLRH++H+ LKNEYL  + P  LW
Sbjct: 20  LSWILDAELHLDAMNLGATIKQGNQASLQDRAKALIFLRHNLHEGLKNEYLTVKDPFTLW 79



 Score = 39.7 bits (91), Expect(3) = 6e-22
 Identities = 19/28 (67%), Positives = 23/28 (82%)
 Frame = -2

Query: 86  MLKVNGSTFHASNVLLQQ*YRERRFSKF 3
           ML+   +TFHASNVLLQQ YRE RF+K+
Sbjct: 138 MLEKTFTTFHASNVLLQQQYRECRFTKY 165



 Score = 38.5 bits (88), Expect(3) = 6e-22
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = -1

Query: 135 NSMKDRYDHQKMVILPNAQSEWLNL 61
           +++K+RYDHQK VILP A+ +W++L
Sbjct: 80  SNLKERYDHQKTVILPKARYDWMHL 104


>emb|CAN77377.1| hypothetical protein VITISV_020255 [Vitis vinifera]
          Length = 263

 Score = 65.5 bits (158), Expect(3) = 4e-21
 Identities = 31/60 (51%), Positives = 39/60 (65%)
 Frame = -3

Query: 316 LSWQFDAEIHLQSKKLGDAIKEGNKMSPEENAISLIFLRHHIHDDLKNEYLIEEHPAGLW 137
           LSW  D EIHL +  LG+ IKEGN  S ++   +LIFLRHHI + LK EYL  + P  +W
Sbjct: 20  LSWVLDVEIHLDAMNLGNTIKEGNDASLQDCTKALIFLRHHIDEGLKGEYLTVKDPFIIW 79



 Score = 41.2 bits (95), Expect(3) = 4e-21
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 86  MLKVNGSTFHASNVLLQQ*YRERRFSKF 3
           ML+   +TFHASNVLLQ+ YRERRF+K+
Sbjct: 138 MLEKTFTTFHASNVLLQKQYRERRFTKY 165



 Score = 39.7 bits (91), Expect(3) = 4e-21
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = -1

Query: 144 VFGNSMKDRYDHQKMVILPNAQSEWLNL 61
           +  N++++RYDHQK VILP A+ +W++L
Sbjct: 77  IIWNNLRERYDHQKTVILPKARYDWMHL 104


Top