BLASTX nr result

ID: Coptis25_contig00042094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042094
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]   149   2e-34
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...   149   2e-34
ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 iso...   147   9e-34
ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 iso...   147   9e-34
ref|XP_002275468.1| PREDICTED: serine palmitoyltransferase 2 [Vi...   145   4e-33

>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/94 (80%), Positives = 84/94 (89%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   NDSPVIPIMIYNPGKIPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTREDLMK 182
           NDSPV+PIM+YNP KIPAFSRECL+QNVAVVIVGFPAT L LARARICISA+H+REDL K
Sbjct: 396 NDSPVMPIMLYNPAKIPAFSRECLKQNVAVVIVGFPATPLLLARARICISAAHSREDLNK 455

Query: 183 GLEVINRVGDLVGMKYLPAEPKKQ----HRVKLE 272
            LEVI+RVGDLVG+KY PAEPKKQ    +RVKLE
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPKKQQLEENRVKLE 489


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/94 (80%), Positives = 84/94 (89%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   NDSPVIPIMIYNPGKIPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTREDLMK 182
           NDSPV+PIM+YNP KIPAFSRECL+QNVAVVIVGFPAT L LARARICISA+H+REDL K
Sbjct: 396 NDSPVMPIMLYNPAKIPAFSRECLKQNVAVVIVGFPATPLLLARARICISAAHSREDLNK 455

Query: 183 GLEVINRVGDLVGMKYLPAEPKKQ----HRVKLE 272
            LEVI+RVGDLVG+KY PAEPKKQ    +RVKLE
Sbjct: 456 ALEVISRVGDLVGIKYFPAEPKKQQLEENRVKLE 489


>ref|XP_003634228.1| PREDICTED: serine palmitoyltransferase 2 isoform 2 [Vitis vinifera]
           gi|297734488|emb|CBI15735.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/94 (79%), Positives = 82/94 (87%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   NDSPVIPIMIYNPGKIPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTREDLMK 182
           NDSPV+PIM+YNP KIPAFSRECL+QNVAVV V FPAT L LARARICISASHTREDL+K
Sbjct: 420 NDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARICISASHTREDLIK 479

Query: 183 GLEVINRVGDLVGMKYLPAEPKKQH----RVKLE 272
           GLEVI+RVGDLV +KY PAEP+KQ     RVKLE
Sbjct: 480 GLEVISRVGDLVAIKYFPAEPRKQQLEEGRVKLE 513


>ref|XP_002284409.1| PREDICTED: serine palmitoyltransferase 2 isoform 1 [Vitis vinifera]
          Length = 489

 Score =  147 bits (371), Expect = 9e-34
 Identities = 75/94 (79%), Positives = 82/94 (87%), Gaps = 4/94 (4%)
 Frame = +3

Query: 3   NDSPVIPIMIYNPGKIPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTREDLMK 182
           NDSPV+PIM+YNP KIPAFSRECL+QNVAVV V FPAT L LARARICISASHTREDL+K
Sbjct: 396 NDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARICISASHTREDLIK 455

Query: 183 GLEVINRVGDLVGMKYLPAEPKKQH----RVKLE 272
           GLEVI+RVGDLV +KY PAEP+KQ     RVKLE
Sbjct: 456 GLEVISRVGDLVAIKYFPAEPRKQQLEEGRVKLE 489


>ref|XP_002275468.1| PREDICTED: serine palmitoyltransferase 2 [Vitis vinifera]
           gi|296082288|emb|CBI21293.3| unnamed protein product
           [Vitis vinifera]
          Length = 489

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = +3

Query: 3   NDSPVIPIMIYNPGKIPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTREDLMK 182
           NDSPV+PIM+YNPGKIPAFSRECL+QNVAVV+  FPAT L LARARICISASHT+EDL+K
Sbjct: 396 NDSPVMPIMLYNPGKIPAFSRECLKQNVAVVMSAFPATPLLLARARICISASHTKEDLIK 455

Query: 183 GLEVINRVGDLVGMKYLPAEPKKQHR 260
           GLEVI+RVGDLVG+KY PA+PK+Q +
Sbjct: 456 GLEVISRVGDLVGIKYFPAQPKEQQQ 481


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