BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042090
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMC90209.1| hypothetical protein A306_00628, partial [Columba...    55   6e-06

>gb|EMC90209.1| hypothetical protein A306_00628, partial [Columba livia]
          Length = 102

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
 Frame = -2

Query: 533 YVCIYGSMLACLYIQMFIHAYIKELLVL*AYM*LCMY-----CLYVHMYGCSIYVFVYKC 369
           Y+CIY SM  C+Y+ M++  Y+   L +   M LC+Y     C+YV MY C IYV +Y C
Sbjct: 29  YLCIYVSMYLCIYVSMYLCIYVSMYLCIYVSMYLCIYVSMYLCIYVSMYLC-IYVSMYLC 87

Query: 368 --VSVHQCTW 345
             VS++ C +
Sbjct: 88  IYVSMYLCIY 97