BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042085
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|2...   177   8e-43
ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, puta...   172   2e-41
ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera] gi|2...   166   2e-39
gb|ACJ84839.1| unknown [Medicago truncatula] gi|388522547|gb|AFK...   159   2e-37

>ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|222842988|gb|EEE80535.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  177 bits (449), Expect = 8e-43
 Identities = 90/131 (68%), Positives = 105/131 (80%)
 Frame = -2

Query: 393 MDSTSSPISPRKLRSDLYSFSSYQDDSNMPSVISVLASLLERTIARNERITRTCARTLSK 214
           M ++S  ISPRKLRSDLYS+S YQ+DSN P VISVLASL+ERT+ARNERI + C   LSK
Sbjct: 1   MATSSLAISPRKLRSDLYSYS-YQNDSNTPLVISVLASLIERTMARNERIVKNCTWALSK 59

Query: 213 DIRIRSFECHGTLDRTTQSFLERIYRYVRVDPPIYVVAYIYIDRLCQLHPEFQITSGNVH 34
           DIR R F+CH T D T QS+LER++RY R  P +YVVAY+YIDR CQ +P F+I S NVH
Sbjct: 60  DIRTRVFDCHETPDLTIQSYLERVFRYTRAGPSVYVVAYVYIDRFCQANPGFRINSRNVH 119

Query: 33  RLLITTIMVAS 1
           RLLITTIMVAS
Sbjct: 120 RLLITTIMVAS 130


>ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|222861482|gb|EEE99024.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/131 (67%), Positives = 105/131 (80%)
 Frame = -2

Query: 393 MDSTSSPISPRKLRSDLYSFSSYQDDSNMPSVISVLASLLERTIARNERITRTCARTLSK 214
           M ++S  ISPRKLRSDLYS+S YQ+DSN P VI+VLASL+ERT+ARNERI + C   LSK
Sbjct: 1   MATSSLAISPRKLRSDLYSYS-YQNDSNTPLVIAVLASLIERTMARNERIVKNCTWALSK 59

Query: 213 DIRIRSFECHGTLDRTTQSFLERIYRYVRVDPPIYVVAYIYIDRLCQLHPEFQITSGNVH 34
           D R R F+CH T D T QS+LERI+RY R  P +YVVAY+YIDR CQ +PEF+I + NVH
Sbjct: 60  DTRTRVFDCHETPDLTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQANPEFRINARNVH 119

Query: 33  RLLITTIMVAS 1
           RLLITTIMVAS
Sbjct: 120 RLLITTIMVAS 130


>ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
           gi|223548828|gb|EEF50317.1| Nuc-1 negative regulatory
           protein preg, putative [Ricinus communis]
          Length = 224

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/131 (65%), Positives = 108/131 (82%)
 Frame = -2

Query: 393 MDSTSSPISPRKLRSDLYSFSSYQDDSNMPSVISVLASLLERTIARNERITRTCARTLSK 214
           M ++S  ISPRKLRSDLYS+S YQ+DS++P VISVLASL+ERT+ARNERI + C+  LSK
Sbjct: 1   MAASSLAISPRKLRSDLYSYS-YQNDSSIPLVISVLASLIERTMARNERIAKNCSWALSK 59

Query: 213 DIRIRSFECHGTLDRTTQSFLERIYRYVRVDPPIYVVAYIYIDRLCQLHPEFQITSGNVH 34
           DI+ R F+C+ T D T QS+LERI+RY R  P +YVVAY+YIDR CQ +P F+I++ NVH
Sbjct: 60  DIKTRVFDCYETPDMTIQSYLERIFRYTRTGPSVYVVAYVYIDRFCQANPGFRISARNVH 119

Query: 33  RLLITTIMVAS 1
           RLLITT+MVAS
Sbjct: 120 RLLITTVMVAS 130


>ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera]
           gi|297734540|emb|CBI16591.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  166 bits (419), Expect = 2e-39
 Identities = 84/134 (62%), Positives = 105/134 (78%)
 Frame = -2

Query: 402 TSPMDSTSSPISPRKLRSDLYSFSSYQDDSNMPSVISVLASLLERTIARNERITRTCART 223
           +S   S++  ISPRKLR+DLYS+S YQ+DSN P VISVLASL+ERT+ARNERI +   R 
Sbjct: 4   SSSSSSSALTISPRKLRTDLYSYS-YQEDSNTPLVISVLASLIERTMARNERIAKNSPRG 62

Query: 222 LSKDIRIRSFECHGTLDRTTQSFLERIYRYVRVDPPIYVVAYIYIDRLCQLHPEFQITSG 43
           LS+ +R   F+CH T D T QS+LERI+RY R  P +YVVAY+YIDR CQ++P F+I++ 
Sbjct: 63  LSRYLRTGVFDCHETPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQINPGFRISAS 122

Query: 42  NVHRLLITTIMVAS 1
           NVH LLITTIMVAS
Sbjct: 123 NVHGLLITTIMVAS 136


>gb|ACJ84839.1| unknown [Medicago truncatula] gi|388522547|gb|AFK49335.1| unknown
           [Medicago truncatula]
          Length = 224

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/131 (61%), Positives = 101/131 (77%)
 Frame = -2

Query: 393 MDSTSSPISPRKLRSDLYSFSSYQDDSNMPSVISVLASLLERTIARNERITRTCARTLSK 214
           M S+S  ISPRKLRSD+YSFS YQ DS+ P VI+VLASL+ER +AR +RI + C+R+LSK
Sbjct: 1   MASSSLTISPRKLRSDVYSFS-YQQDSSTPLVINVLASLIERNMARTKRIVKNCSRSLSK 59

Query: 213 DIRIRSFECHGTLDRTTQSFLERIYRYVRVDPPIYVVAYIYIDRLCQLHPEFQITSGNVH 34
            I    F+C    D T QS+LERI+RY +  P +YVVAY+YIDR CQ++P F+I + NVH
Sbjct: 60  AISTNIFDCREIPDLTIQSYLERIFRYTKAGPSVYVVAYVYIDRFCQINPGFRINARNVH 119

Query: 33  RLLITTIMVAS 1
           RLLITTIMVAS
Sbjct: 120 RLLITTIMVAS 130