BLASTX nr result
ID: Coptis25_contig00042072
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042072 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513456.1| conserved hypothetical protein [Ricinus comm... 68 7e-10 ref|XP_002283003.2| PREDICTED: uncharacterized protein LOC100248... 66 3e-09 emb|CBI16417.3| unnamed protein product [Vitis vinifera] 66 3e-09 emb|CAN80883.1| hypothetical protein VITISV_018652 [Vitis vinifera] 66 3e-09 ref|XP_002297789.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 >ref|XP_002513456.1| conserved hypothetical protein [Ricinus communis] gi|223547364|gb|EEF48859.1| conserved hypothetical protein [Ricinus communis] Length = 490 Score = 68.2 bits (165), Expect = 7e-10 Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 3/60 (5%) Frame = +1 Query: 85 APPSLISLSNFSP---STPRRLSSQFNNPTRPINSSRRLSWVSLQGRLVNADEASCGEAI 255 APPS+++LS FSP + RRLSS F P+RP+ S+RRL+WVSL+GRLVNA+EAS +AI Sbjct: 15 APPSVVTLSPFSPIPVPSSRRLSSHFI-PSRPVPSARRLAWVSLRGRLVNAEEASSAKAI 73 >ref|XP_002283003.2| PREDICTED: uncharacterized protein LOC100248335 [Vitis vinifera] Length = 386 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 3/58 (5%) Frame = +1 Query: 91 PSLISLSNFSPS---TPRRLSSQFNNPTRPINSSRRLSWVSLQGRLVNADEASCGEAI 255 P+L+SL FSPS +PRRLSS F P+RP+ ++R+L+WV L+GRLV A+E S AI Sbjct: 15 PALVSLLPFSPSVSPSPRRLSSNFTQPSRPVRAARQLAWVDLRGRLVGAEECSSARAI 72 >emb|CBI16417.3| unnamed protein product [Vitis vinifera] Length = 422 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 3/58 (5%) Frame = +1 Query: 91 PSLISLSNFSPS---TPRRLSSQFNNPTRPINSSRRLSWVSLQGRLVNADEASCGEAI 255 P+L+SL FSPS +PRRLSS F P+RP+ ++R+L+WV L+GRLV A+E S AI Sbjct: 15 PALVSLLPFSPSVSPSPRRLSSNFTQPSRPVRAARQLAWVDLRGRLVGAEECSSARAI 72 >emb|CAN80883.1| hypothetical protein VITISV_018652 [Vitis vinifera] Length = 522 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 3/58 (5%) Frame = +1 Query: 91 PSLISLSNFSPS---TPRRLSSQFNNPTRPINSSRRLSWVSLQGRLVNADEASCGEAI 255 P+L+SL FSPS +PRRLSS F P+RP+ ++R+L+WV L+GRLV A+E S AI Sbjct: 15 PALVSLLPFSPSVSPSPRRLSSNFTQPSRPVRAARQLAWVDLRGRLVGAEECSSARAI 72 >ref|XP_002297789.1| predicted protein [Populus trichocarpa] gi|222845047|gb|EEE82594.1| predicted protein [Populus trichocarpa] Length = 380 Score = 62.8 bits (151), Expect = 3e-08 Identities = 39/67 (58%), Positives = 46/67 (68%), Gaps = 6/67 (8%) Frame = +1 Query: 73 ASKHAPPS--LISLSNF----SPSTPRRLSSQFNNPTRPINSSRRLSWVSLQGRLVNADE 234 +S PPS ++LS F SPS+ RRLSS F PTR I SS RL+WVSL+GRLVNA+E Sbjct: 17 SSAQVPPSSSFVTLSPFPPIPSPSSRRRLSSHFT-PTRAITSSLRLAWVSLRGRLVNAEE 75 Query: 235 ASCGEAI 255 AS AI Sbjct: 76 ASSANAI 82