BLASTX nr result

ID: Coptis25_contig00042056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042056
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551578.1| PREDICTED: uncharacterized protein LOC100811...   113   1e-23
gb|AFW77169.1| hypothetical protein ZEAMMB73_104442 [Zea mays]        108   6e-22
ref|NP_001159315.1| uncharacterized protein LOC100304407 [Zea ma...   108   6e-22
emb|CBI18099.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267...   102   3e-20

>ref|XP_003551578.1| PREDICTED: uncharacterized protein LOC100811782 [Glycine max]
          Length = 714

 Score =  113 bits (283), Expect = 1e-23
 Identities = 52/83 (62%), Positives = 62/83 (74%)
 Frame = +3

Query: 3   LTPMSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCL 182
           L PMSSVRSYAS   LNG IY FGG NGY  +WYDT E YNP+ + W  CP + +KKG L
Sbjct: 460 LKPMSSVRSYASVVWLNGEIYVFGGGNGY--VWYDTVESYNPVHDNWTLCPSLNQKKGSL 517

Query: 183 ASACLNNKIYAVGGGNGIDCFKE 251
           + A LN+KI+AVGGGNG+DCF +
Sbjct: 518 SGAALNDKIFAVGGGNGVDCFSD 540



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/74 (40%), Positives = 41/74 (55%)
 Frame = +3

Query: 12  MSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCLASA 191
           M   R   SA  LNG IY  GG++G   L   +AE ++P  + W   P M  K+GC +  
Sbjct: 557 MLEKRFALSAVELNGAIYAIGGFDGNDYL--RSAERFDPREHSWTKIPNMNVKRGCHSLV 614

Query: 192 CLNNKIYAVGGGNG 233
            LN K+YA+GG +G
Sbjct: 615 VLNEKLYALGGFDG 628


>gb|AFW77169.1| hypothetical protein ZEAMMB73_104442 [Zea mays]
          Length = 733

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = +3

Query: 3   LTPMSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCL 182
           LTPMSS RSYASAAVL+G I+ FGG +G S  WY+T ECY+  +NEW  CP M +KKG L
Sbjct: 482 LTPMSSPRSYASAAVLDGHIFAFGGGDGMS--WYNTVECYSSRNNEWTECPSMNQKKGSL 539

Query: 183 ASACLNNKIYAVGGGNGIDCFKE 251
           A  CLN KIYA+GGG+G + + E
Sbjct: 540 AGICLNEKIYAIGGGDGNEFYSE 562


>ref|NP_001159315.1| uncharacterized protein LOC100304407 [Zea mays]
           gi|223943353|gb|ACN25760.1| unknown [Zea mays]
           gi|413944519|gb|AFW77168.1| hypothetical protein
           ZEAMMB73_104442 [Zea mays]
          Length = 676

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = +3

Query: 3   LTPMSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCL 182
           LTPMSS RSYASAAVL+G I+ FGG +G S  WY+T ECY+  +NEW  CP M +KKG L
Sbjct: 425 LTPMSSPRSYASAAVLDGHIFAFGGGDGMS--WYNTVECYSSRNNEWTECPSMNQKKGSL 482

Query: 183 ASACLNNKIYAVGGGNGIDCFKE 251
           A  CLN KIYA+GGG+G + + E
Sbjct: 483 AGICLNEKIYAIGGGDGNEFYSE 505


>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = +3

Query: 3   LTPMSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCL 182
           L+PM+  RSYAS AVLNG +Y FGG NG    WYDT E YN +SNEW    P+ ++KG L
Sbjct: 394 LSPMTMPRSYASVAVLNGELYIFGGGNGSE--WYDTVEAYNLVSNEWTLRAPLNKEKGSL 451

Query: 183 ASACLNNKIYAVGGGNGIDCFKE 251
           A A LN KI+A+GGGNGI+CF +
Sbjct: 452 AGATLNGKIFALGGGNGIECFSD 474


>ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267149 [Vitis vinifera]
          Length = 664

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/83 (59%), Positives = 60/83 (72%)
 Frame = +3

Query: 3   LTPMSSVRSYASAAVLNGLIYNFGGWNGYSGLWYDTAECYNPLSNEWHSCPPMREKKGCL 182
           L+PM+  RSYAS AVLNG +Y FGG NG    WYDT E YN +SNEW    P+ ++KG L
Sbjct: 413 LSPMTMPRSYASVAVLNGELYIFGGGNGSE--WYDTVEAYNLVSNEWTLRAPLNKEKGSL 470

Query: 183 ASACLNNKIYAVGGGNGIDCFKE 251
           A A LN KI+A+GGGNGI+CF +
Sbjct: 471 AGATLNGKIFALGGGNGIECFSD 493


Top