BLASTX nr result

ID: Coptis25_contig00042034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042034
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323847.1| multidrug/pheromone exporter, MDR family, AB...   179   2e-43
ref|XP_002517493.1| multidrug resistance protein 1, 2, putative ...   176   2e-42
ref|XP_002877137.1| P-glycoprotein 19 [Arabidopsis lyrata subsp....   174   7e-42
gb|ABX82929.1| LO4 [Solanum pennellii]                                174   7e-42
ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|A...   174   7e-42

>ref|XP_002323847.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222866849|gb|EEF03980.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1251

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/97 (85%), Positives = 92/97 (94%)
 Frame = -2

Query: 292 KKQKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEMVNGFGKNQSDL 113
           +K+KE SLPFY+LFSFADKYD+LLM+ GSIGA +HGS+MPVFFLLFGEMVNGFGKNQSDL
Sbjct: 16  EKKKEQSLPFYQLFSFADKYDWLLMISGSIGAIIHGSSMPVFFLLFGEMVNGFGKNQSDL 75

Query: 112 NQMTHQVSKYALYFVYLGIVVCFSSYAEIACWMYTGE 2
            +MTH+VSKYALYFVYLGIVVC SSYAEIACWMYTGE
Sbjct: 76  YKMTHEVSKYALYFVYLGIVVCLSSYAEIACWMYTGE 112


>ref|XP_002517493.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223543504|gb|EEF45035.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1259

 Score =  176 bits (445), Expect = 2e-42
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = -2

Query: 292 KKQKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEMVNGFGKNQSDL 113
           +K+KE SLPFY+LFSFAD YD+LLM+ GS GA +HGS+MPVFFLLFGEMVNGFGKNQSDL
Sbjct: 24  EKKKEQSLPFYQLFSFADNYDWLLMISGSTGAIIHGSSMPVFFLLFGEMVNGFGKNQSDL 83

Query: 112 NQMTHQVSKYALYFVYLGIVVCFSSYAEIACWMYTGE 2
            +MTH+VSKYALYFVYLG+VVC SSYAEIACWMYTGE
Sbjct: 84  TKMTHEVSKYALYFVYLGLVVCLSSYAEIACWMYTGE 120


>ref|XP_002877137.1| P-glycoprotein 19 [Arabidopsis lyrata subsp. lyrata]
           gi|297322975|gb|EFH53396.1| P-glycoprotein 19
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1252

 Score =  174 bits (441), Expect = 7e-42
 Identities = 79/97 (81%), Positives = 91/97 (93%)
 Frame = -2

Query: 292 KKQKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEMVNGFGKNQSDL 113
           +K+KE SLPF+KLFSFADK+DYLLM  GS+GA VHGS+MPVFFLLFG+MVNGFGKNQ DL
Sbjct: 17  EKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLLFGQMVNGFGKNQMDL 76

Query: 112 NQMTHQVSKYALYFVYLGIVVCFSSYAEIACWMYTGE 2
           +QM H+VSKY+LYFVYLG+VVCFSSYAEIACWMY+GE
Sbjct: 77  HQMVHEVSKYSLYFVYLGLVVCFSSYAEIACWMYSGE 113


>gb|ABX82929.1| LO4 [Solanum pennellii]
          Length = 1249

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = -2

Query: 292 KKQKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEMVNGFGKNQSDL 113
           +K+KE SLPFY+LFSFADKYDYLLM  GSIGA +HGS+MPVFFLLFGEMVNGFGKNQ DL
Sbjct: 14  EKKKEQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPVFFLLFGEMVNGFGKNQMDL 73

Query: 112 NQMTHQVSKYALYFVYLGIVVCFSSYAEIACWMYTGE 2
           ++MTH+VSKYALYFVYLG++VC SSYAEI CWMYTGE
Sbjct: 74  HKMTHEVSKYALYFVYLGLIVCASSYAEIGCWMYTGE 110


>ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|ABX82928.1| L04 [Solanum
           lycopersicum]
          Length = 1249

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = -2

Query: 292 KKQKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEMVNGFGKNQSDL 113
           +K+KE SLPFY+LFSFADKYDYLLM  GSIGA +HGS+MPVFFLLFGEMVNGFGKNQ DL
Sbjct: 14  EKKKEQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPVFFLLFGEMVNGFGKNQMDL 73

Query: 112 NQMTHQVSKYALYFVYLGIVVCFSSYAEIACWMYTGE 2
           ++MTH+VSKYALYFVYLG++VC SSYAEI CWMYTGE
Sbjct: 74  HKMTHEVSKYALYFVYLGLIVCASSYAEIGCWMYTGE 110


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