BLASTX nr result

ID: Coptis25_contig00042013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042013
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]      139   2e-31
emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]   139   2e-31
ref|XP_002521498.1| NAC domain-containing protein, putative [Ric...   127   7e-28
ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trich...   125   4e-27
ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trich...   117   7e-25

>ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]
          Length = 312

 Score =  139 bits (351), Expect = 2e-31
 Identities = 77/121 (63%), Positives = 90/121 (74%), Gaps = 5/121 (4%)
 Frame = -1

Query: 430 YGFTFDSSMHLPQLLSPDQLN----VSPSFLNTMDIECSQNLLKLTSTDTGAGLMQQERF 263
           Y F FD SMHLPQLLSP+       +SP  LNTMDIECSQNLL+LTST  G GL+QQER 
Sbjct: 197 YDFNFDGSMHLPQLLSPESAVPPSFISPLSLNTMDIECSQNLLRLTST--GCGLIQQERM 254

Query: 262 NGDWSFLDKLLVSQQGVDQFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLKYT 86
           NGDWSFLDKLL S Q +DQ  Q+K + SSQ+VD VG S QKFPF +   +G ETD+LK++
Sbjct: 255 NGDWSFLDKLLASHQSLDQHSQTKCHPSSQVVDHVGTSAQKFPFQY---LGCETDILKFS 311

Query: 85  K 83
           K
Sbjct: 312 K 312


>emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]
          Length = 311

 Score =  139 bits (351), Expect = 2e-31
 Identities = 77/121 (63%), Positives = 90/121 (74%), Gaps = 5/121 (4%)
 Frame = -1

Query: 430 YGFTFDSSMHLPQLLSPDQLN----VSPSFLNTMDIECSQNLLKLTSTDTGAGLMQQERF 263
           Y F FD SMHLPQLLSP+       +SP  LNTMDIECSQNLL+LTST  G GL+QQER 
Sbjct: 196 YDFNFDGSMHLPQLLSPESAVPPSFISPLSLNTMDIECSQNLLRLTST--GCGLIQQERM 253

Query: 262 NGDWSFLDKLLVSQQGVDQFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLKYT 86
           NGDWSFLDKLL S Q +DQ  Q+K + SSQ+VD VG S QKFPF +   +G ETD+LK++
Sbjct: 254 NGDWSFLDKLLASHQSLDQHSQTKCHPSSQVVDHVGTSAQKFPFQY---LGCETDILKFS 310

Query: 85  K 83
           K
Sbjct: 311 K 311


>ref|XP_002521498.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223539295|gb|EEF40887.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 314

 Score =  127 bits (320), Expect = 7e-28
 Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 7/123 (5%)
 Frame = -1

Query: 430 YGFTFDSSMHLPQLLSPDQLNVSPSF-----LNTMDIECSQNLLKLTSTDTGAGLMQQER 266
           Y + FD SMHLPQL SP+   V PSF     LNTMDIECSQNLL+LTST    GL+Q ER
Sbjct: 199 YDYNFDGSMHLPQLFSPESAAVPPSFVTPLSLNTMDIECSQNLLRLTSTS--CGLVQPER 256

Query: 265 FNGDWSFLDKLLVSQQGVDQFCQSKWNSSSQLVDVGPST--QKFPFHHYLGVGGETDMLK 92
           F+GDWSFLDKLL S Q +D   Q K N SSQ+VD+G S   QKFPF +   +G ETD+++
Sbjct: 257 FHGDWSFLDKLLASHQSLDH--QGKGNPSSQVVDMGASVHHQKFPFPY---LGCETDIMR 311

Query: 91  YTK 83
           ++K
Sbjct: 312 FSK 314


>ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222865203|gb|EEF02334.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 318

 Score =  125 bits (314), Expect = 4e-27
 Identities = 78/124 (62%), Positives = 92/124 (74%), Gaps = 10/124 (8%)
 Frame = -1

Query: 424 FTFDSSMHLPQLLSPDQLNVSPSF-----LNTMD-IECSQNLLKLTSTDTGAGLMQQE-R 266
           +TFD SMHLPQL SP+   V+PSF     LN MD IECSQNLL+LTST  G GL+Q   R
Sbjct: 201 YTFDGSMHLPQLFSPESA-VAPSFVSPLSLNNMDDIECSQNLLRLTST--GCGLVQPAGR 257

Query: 265 FNGDWSFLDKLLVSQQGVD--QFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDML 95
           FNGDWSFLDKLL SQQ +D  Q  Q+K NSSSQ+VD VG STQKFPF +   +G ETD+L
Sbjct: 258 FNGDWSFLDKLLASQQNLDHHQHYQNKGNSSSQIVDHVGASTQKFPFQY---LGFETDIL 314

Query: 94  KYTK 83
           +++K
Sbjct: 315 RFSK 318


>ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222851096|gb|EEE88643.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 319

 Score =  117 bits (294), Expect = 7e-25
 Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 10/124 (8%)
 Frame = -1

Query: 424 FTFDSSMHLPQLLSPDQLNVSPSFL------NTMDIECSQNLLKLTSTDTGAGLMQQE-R 266
           +T D SMHLPQL SPD   V+PSF+      N  DIECSQNLL+LT +  G G +    R
Sbjct: 202 YTLDGSMHLPQLFSPDSA-VAPSFVSPLSLNNMNDIECSQNLLRLTPS--GCGFVHPAGR 258

Query: 265 FNGDWSFLDKLLVSQQGVD--QFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDML 95
           FNGDWSFLDKLL S Q +D  Q  Q+K NSSSQ+VD VG STQKFPF H   +G ETD+L
Sbjct: 259 FNGDWSFLDKLLASHQNLDHQQHYQNKRNSSSQIVDPVGTSTQKFPFQH---LGFETDIL 315

Query: 94  KYTK 83
           +++K
Sbjct: 316 RFSK 319


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