BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042012
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        90   2e-16
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 89   4e-16
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    89   4e-16
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    88   6e-16

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 2/136 (1%)
 Frame = +3

Query: 60  KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 239
           KV  W  R LS+AGR+ LI SV  S  +Y A  F+LP  V+  V QI   FL SGS M  
Sbjct: 83  KVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRT 142

Query: 240 KMHQSSRENIQYPKMEGGLGIQDLIIWNRATYCGLIYKIACKDS--GIWITWTWAEHIKE 413
              + + + +  PK EGGLGI+ +  WN+      I+ + C DS   IW TW  +  ++ 
Sbjct: 143 TGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL-CNDSDGSIWSTWIRSNLLRG 201

Query: 414 NFFWTMSVPKDCSWTW 461
             FWT+  P++CSW W
Sbjct: 202 RNFWTIKTPQNCSWAW 217


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/134 (33%), Positives = 71/134 (52%)
 Frame = +3

Query: 60   KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 239
            +  SW N+ LS AGR+ LI SV      +   TF+LP+G + ++  +C++FL SG+    
Sbjct: 789  RFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQA 848

Query: 240  KMHQSSRENIQYPKMEGGLGIQDLIIWNRATYCGLIYKIACKDSGIWITWTWAEHIKENF 419
            K  + S   +  PK EGGLG++ L+ WN+     LI+++      +W  W    H+    
Sbjct: 849  KGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGS 908

Query: 420  FWTMSVPKDCSWTW 461
            FW +   +  SWTW
Sbjct: 909  FWAVEGGQSDSWTW 922


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
 Frame = +3

Query: 60  KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 239
           K+ SW  R LS+AGRL LI SV  S   +    + LP G + ++ ++C+ FL SG ++  
Sbjct: 369 KISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNP 428

Query: 240 KMHQSSRENIQYPKMEGGLGIQDLIIWNRATYCGLIYKIACKDSGIWITWTWAEHIKENF 419
           K  + +  ++   K EGGLGI+ L+  N+ +   LI+++  + S +W+ W W   I++  
Sbjct: 429 KKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGS 488

Query: 420 FWTMSVPKDC-SWTW 461
           FW+ +      SW W
Sbjct: 489 FWSANDRSSLGSWMW 503


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/135 (33%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
 Frame = +3

Query: 60   KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 239
            K+ SW  R LS+AGRL LI SV  S   +    + LP G + ++ ++C+ FL SG ++  
Sbjct: 938  KISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWSGPELNP 997

Query: 240  KMHQSSRENIQYPKMEGGLGIQDLIIWNRATYCGLIYKIACKDSGIWITWTWAEHIKENF 419
            K  + +  ++   K EGGLGI+ L+  N+ +   LI+++  + S +W+ W W   I++  
Sbjct: 998  KKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGS 1057

Query: 420  FWTMSVPKDC-SWTW 461
            FW+ +      SW W
Sbjct: 1058 FWSANDRSSLGSWMW 1072


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
 Frame = +3

Query: 60   KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 239
            K+ SW  R LS+AGRL L+ SV  S   +    + LP G + ++ ++C+ FL SG  +  
Sbjct: 1093 KISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNP 1152

Query: 240  KMHQSSRENIQYPKMEGGLGIQDLIIWNRATYCGLIYKIACKDSGIWITWTWAEHIKENF 419
            K  + +  +I  PK EGGLGI+ L   N+ +   LI+++      +W+TW W   I++  
Sbjct: 1153 KKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGT 1212

Query: 420  FWTMSVPKDC-SWTW 461
            FW+ +      SW W
Sbjct: 1213 FWSANERSSLGSWMW 1227