BLASTX nr result

ID: Coptis25_contig00042010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042010
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24025.3| unnamed protein product [Vitis vinifera]              207   2e-51
ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808...   201   1e-49
ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244...   201   1e-49
emb|CBI29042.3| unnamed protein product [Vitis vinifera]              195   5e-48
emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]   191   1e-46

>emb|CBI24025.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  207 bits (526), Expect = 2e-51
 Identities = 108/219 (49%), Positives = 134/219 (61%), Gaps = 14/219 (6%)
 Frame = -1

Query: 641 NCTNLNCTYDLCLTCSSEIRKDSTQEDGEGSHARSTSSWKVEENGRLSCPSKEMGGCDSG 462
           NC N  C+YDLCLTC  EI+ +            +   WKV+ENG + C  KEMGGC  G
Sbjct: 315 NCPN--CSYDLCLTCCREIQSNFCVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHG 372

Query: 461 YLELKCIFPENWVTNLKIKAE---------EIAAVPSSLT-----DGRIERDKKNLRRAA 324
            L+LKC+F E WV+ LK KAE         ++  +P+        +  I+ D K LR+AA
Sbjct: 373 RLDLKCMFSETWVSELKEKAEGLVKTHKLTDVLGIPACSCSCFKLNSEIDFDNKKLRKAA 432

Query: 323 CREVSNDNYLYCPSAKDIQRGDLNHFQKHWTKGEPVVVQNVLELTPGLSWDPLVMCRALR 144
            RE S DNYLYCPS  DI +GDL HFQ HW KGEPV+V +VLE T GLSW+P+VM RA R
Sbjct: 433 AREDSFDNYLYCPSESDILQGDLVHFQSHWMKGEPVIVSDVLEFTSGLSWEPMVMWRAFR 492

Query: 143 EKTNSRVLKDKHLDVTAIDCLVWREVEINISTFFRGYSD 27
           + + +   K   L   AIDCL W EVEINI  FF+GYS+
Sbjct: 493 KVSYT---KSSQLAEKAIDCLDWCEVEINIHQFFKGYSE 528


>ref|XP_003537382.1| PREDICTED: uncharacterized protein LOC100808936 [Glycine max]
          Length = 1106

 Score =  201 bits (511), Expect = 1e-49
 Identities = 112/247 (45%), Positives = 138/247 (55%), Gaps = 47/247 (19%)
 Frame = -1

Query: 626  NCTYDLCLTCSSEIR--------------------------------KDSTQEDGEGSHA 543
            +C+YDLCLTC  EIR                                K+S+    E S  
Sbjct: 316  SCSYDLCLTCCREIRCNFLSGEIVEQCVVVSNAHSHGGEPLDPHSCKKESSDIYLESSSV 375

Query: 542  RSTSSWKVEENGRLSCPSKEMGGCDSGYLELKCIFPENWVTNLKIKAEEIAAVPSSLTD- 366
            R    WK  +NG + C  K+ GGC   YLELKCIFP+NW++ L+ K + +  V   L D 
Sbjct: 376  RPEHLWKAMKNGAIPCSPKDNGGCGYEYLELKCIFPQNWISKLREKVKRLIKV-HGLEDK 434

Query: 365  --------------GRIERDKKNLRRAACREVSNDNYLYCPSAKDIQRGDLNHFQKHWTK 228
                            I    +NLR+AA RE S+DNYLYCPSA D++ GDL HFQ HW K
Sbjct: 435  PTVSAWCSSCFKSHDEIGSINENLRKAATREGSSDNYLYCPSASDVKYGDLEHFQGHWIK 494

Query: 227  GEPVVVQNVLELTPGLSWDPLVMCRALREKTNSRVLKDKHLDVTAIDCLVWREVEINIST 48
            GEPV+V+N LELT GLSW+P+VM RA+RE T       KHL+V AIDCL W EVEINI  
Sbjct: 495  GEPVIVRNALELTSGLSWEPMVMWRAMRELTYH---GSKHLNVKAIDCLDWCEVEINIHQ 551

Query: 47   FFRGYSD 27
            FF+GYS+
Sbjct: 552  FFKGYSE 558


>ref|XP_002264447.2| PREDICTED: uncharacterized protein LOC100244450 [Vitis vinifera]
          Length = 896

 Score =  201 bits (510), Expect = 1e-49
 Identities = 116/256 (45%), Positives = 142/256 (55%), Gaps = 51/256 (19%)
 Frame = -1

Query: 641  NCTNLNCTYDLCLTCSSEIRKDSTQ----------------------------EDGEGSH 546
            NC N  C+YDLCLTC  EIR  S Q                            + GE + 
Sbjct: 316  NCPN--CSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHGGKPHMPSVQKGESNF 373

Query: 545  ARSTSS---------WKVEENGRLSCPSKEMGGCDSGYLELKCIFPENWVTNLKIKAE-- 399
              S+SS         WKV+ENG + C  KEMGGC  G L+LKC+F E WV+ LK KAE  
Sbjct: 374  CVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVSELKEKAEGL 433

Query: 398  -------EIAAVPSSLT-----DGRIERDKKNLRRAACREVSNDNYLYCPSAKDIQRGDL 255
                   ++  +P+        +  I+ D K LR+AA RE S DNYLYCPS  DI +GDL
Sbjct: 434  VKTHKLTDVLGIPACSCSCFKLNSEIDFDNKKLRKAAAREDSFDNYLYCPSESDILQGDL 493

Query: 254  NHFQKHWTKGEPVVVQNVLELTPGLSWDPLVMCRALREKTNSRVLKDKHLDVTAIDCLVW 75
             HFQ HW KGEPV+V +VLE T GLSW+P+VM RA R+ + +   K   L   AIDCL W
Sbjct: 494  VHFQSHWMKGEPVIVSDVLEFTSGLSWEPMVMWRAFRKVSYT---KSSQLAEKAIDCLDW 550

Query: 74   REVEINISTFFRGYSD 27
             EVEINI  FF+GYS+
Sbjct: 551  CEVEINIHQFFKGYSE 566


>emb|CBI29042.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  195 bits (496), Expect = 5e-48
 Identities = 105/232 (45%), Positives = 136/232 (58%), Gaps = 32/232 (13%)
 Frame = -1

Query: 626  NCTYDLCLTCSSEIRKDSTQEDGEGS-----------------HARSTSSWKVEENGRLS 498
            NC+YDLCL C  EIR    Q   E S                 HA+S S W+  +NG + 
Sbjct: 477  NCSYDLCLICCREIRDGHLQGGEEESSRRKRKLNFPANASPKDHAKSMSGWEANKNGSIP 536

Query: 497  CPSKEMGGCDSGYLELKCIFPENWVTNLKIKAEEIAAVPSSLTD---------------G 363
            CP K +GGC  G LEL+C+  EN+V  L ++AEEIA+  + L D                
Sbjct: 537  CPPKNLGGCGQGLLELRCMLEENFVLGLIMEAEEIAS-SNKLMDISGNPQQCCSCLNFAD 595

Query: 362  RIERDKKNLRRAACREVSNDNYLYCPSAKDIQRGDLNHFQKHWTKGEPVVVQNVLELTPG 183
              + D   LR+ A R+ S+DN LYCP A DIQ  DL HFQ HW +GEP++V++VLE T G
Sbjct: 596  DNDTDNSKLRKGASRDDSSDNNLYCPKATDIQDEDLKHFQWHWLRGEPIIVRDVLENTSG 655

Query: 182  LSWDPLVMCRALREKTNSRVLKDKHLDVTAIDCLVWREVEINISTFFRGYSD 27
            LSW+P+VM RA R+ TN+     +HL+VTA+DCL W EV +NI  FF+GYSD
Sbjct: 656  LSWEPMVMWRAFRQITNTN--HAQHLEVTAMDCLDWCEVAVNIHQFFKGYSD 705


>emb|CAN77727.1| hypothetical protein VITISV_024318 [Vitis vinifera]
          Length = 969

 Score =  191 bits (484), Expect = 1e-46
 Identities = 111/242 (45%), Positives = 132/242 (54%), Gaps = 37/242 (15%)
 Frame = -1

Query: 641 NCTNLNCTYDLCLTCSSEIRKDSTQ----------------------------EDGEGSH 546
           NC N  C+YDLCLTC  EIR  S Q                            + GE + 
Sbjct: 315 NCPN--CSYDLCLTCCREIRNGSLQGGIDEIVMQYFDRGKAYLHGGKPHMPSVQKGESNF 372

Query: 545 ARSTSS---------WKVEENGRLSCPSKEMGGCDSGYLELKCIFPENWVTNLKIKAEEI 393
             S+SS         WKV+ENG + C  KEMGGC  G L+LKC+F E WV+ LK KAE  
Sbjct: 373 CVSSSSKDPGSTICEWKVKENGDIPCAPKEMGGCGHGRLDLKCMFSETWVSELKEKAEG- 431

Query: 392 AAVPSSLTDGRIERDKKNLRRAACREVSNDNYLYCPSAKDIQRGDLNHFQKHWTKGEPVV 213
                            + R+AA RE S DNYLYCPS  DI +GDL HFQ HW KGEPV+
Sbjct: 432 -----------------SWRKAAAREDSFDNYLYCPSESDILQGDLVHFQSHWMKGEPVI 474

Query: 212 VQNVLELTPGLSWDPLVMCRALREKTNSRVLKDKHLDVTAIDCLVWREVEINISTFFRGY 33
           V +VLE T GLSW+P+VM RA R+ + +   K   L   AIDCL W EVEINI  FF+GY
Sbjct: 475 VSDVLEFTSGLSWEPMVMWRAFRKVSYT---KSSQLAEKAIDCLDWCEVEINIHQFFKGY 531

Query: 32  SD 27
           S+
Sbjct: 532 SE 533


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