BLASTX nr result

ID: Coptis25_contig00042000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042000
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE59343.1| hypothetical protein OsJ_11426 [Oryza sativa Japo...   218   5e-55
gb|EEC75564.1| hypothetical protein OsI_12235 [Oryza sativa Indi...   218   5e-55
ref|XP_003562382.1| PREDICTED: LON peptidase N-terminal domain a...   215   3e-54
ref|XP_002514719.1| kinase, putative [Ricinus communis] gi|22354...   212   2e-53
ref|XP_002317975.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53

>gb|EEE59343.1| hypothetical protein OsJ_11426 [Oryza sativa Japonica Group]
          Length = 640

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/113 (89%), Positives = 106/113 (93%)
 Frame = +1

Query: 1   TTPCGHSFCRPCLFQAMDHGNKCPMCRTVLFISPKTYSISVTLKNIIQKNFPEEYAERKS 180
           TTPCGHSFCR CL Q+MDHGNKCPMCRTVLFI PKTY ISVTL NIIQKNFPEEYAERKS
Sbjct: 365 TTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPKTYPISVTLSNIIQKNFPEEYAERKS 424

Query: 181 EHDSLTNLGVDLMPLFVMDVVLPCQKMSLNIFEPRYRLMVRRIMEGNHRMGMV 339
           EH+++T  GVDLMPLFVMDVVLPCQKM+LNIFEPRYRLMVRRIMEGNHRMGMV
Sbjct: 425 EHETMTYAGVDLMPLFVMDVVLPCQKMALNIFEPRYRLMVRRIMEGNHRMGMV 477


>gb|EEC75564.1| hypothetical protein OsI_12235 [Oryza sativa Indica Group]
          Length = 640

 Score =  218 bits (554), Expect = 5e-55
 Identities = 101/113 (89%), Positives = 106/113 (93%)
 Frame = +1

Query: 1   TTPCGHSFCRPCLFQAMDHGNKCPMCRTVLFISPKTYSISVTLKNIIQKNFPEEYAERKS 180
           TTPCGHSFCR CL Q+MDHGNKCPMCRTVLFI PKTY ISVTL NIIQKNFPEEYAERKS
Sbjct: 365 TTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPKTYPISVTLSNIIQKNFPEEYAERKS 424

Query: 181 EHDSLTNLGVDLMPLFVMDVVLPCQKMSLNIFEPRYRLMVRRIMEGNHRMGMV 339
           EH+++T  GVDLMPLFVMDVVLPCQKM+LNIFEPRYRLMVRRIMEGNHRMGMV
Sbjct: 425 EHETMTYAGVDLMPLFVMDVVLPCQKMALNIFEPRYRLMVRRIMEGNHRMGMV 477


>ref|XP_003562382.1| PREDICTED: LON peptidase N-terminal domain and RING finger protein
           1-like [Brachypodium distachyon]
          Length = 480

 Score =  215 bits (548), Expect = 3e-54
 Identities = 100/113 (88%), Positives = 105/113 (92%)
 Frame = +1

Query: 1   TTPCGHSFCRPCLFQAMDHGNKCPMCRTVLFISPKTYSISVTLKNIIQKNFPEEYAERKS 180
           TTPCGHSFCR CL Q+MDHGNKCPMCRTVLFI P+TY ISVTL NIIQKNFPEEYAERKS
Sbjct: 205 TTPCGHSFCRSCLHQSMDHGNKCPMCRTVLFIGPRTYPISVTLSNIIQKNFPEEYAERKS 264

Query: 181 EHDSLTNLGVDLMPLFVMDVVLPCQKMSLNIFEPRYRLMVRRIMEGNHRMGMV 339
           EH++ T  GVDLMPLFVMDVVLPCQKM+LNIFEPRYRLMVRRIMEGNHRMGMV
Sbjct: 265 EHETTTYAGVDLMPLFVMDVVLPCQKMALNIFEPRYRLMVRRIMEGNHRMGMV 317


>ref|XP_002514719.1| kinase, putative [Ricinus communis] gi|223546323|gb|EEF47825.1|
           kinase, putative [Ricinus communis]
          Length = 1646

 Score =  212 bits (540), Expect = 2e-53
 Identities = 98/113 (86%), Positives = 105/113 (92%)
 Frame = +1

Query: 1   TTPCGHSFCRPCLFQAMDHGNKCPMCRTVLFISPKTYSISVTLKNIIQKNFPEEYAERKS 180
           TTPCGHSFCR CLFQ+MD GNKCP+CRTVLFISP+T S+SVTL NIIQKNFPEEYAERKS
Sbjct: 211 TTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISPRTCSVSVTLNNIIQKNFPEEYAERKS 270

Query: 181 EHDSLTNLGVDLMPLFVMDVVLPCQKMSLNIFEPRYRLMVRRIMEGNHRMGMV 339
           EH SLTN GVDL+PLFVMDVV+PCQK  L+IFEPRYRLMVRRIMEGNHRMGMV
Sbjct: 271 EHSSLTNFGVDLIPLFVMDVVIPCQKFPLHIFEPRYRLMVRRIMEGNHRMGMV 323


>ref|XP_002317975.1| predicted protein [Populus trichocarpa] gi|222858648|gb|EEE96195.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  211 bits (538), Expect = 4e-53
 Identities = 98/113 (86%), Positives = 104/113 (92%)
 Frame = +1

Query: 1   TTPCGHSFCRPCLFQAMDHGNKCPMCRTVLFISPKTYSISVTLKNIIQKNFPEEYAERKS 180
           TTPCGHSFCR CLFQ+MD GNKCP+CRTVLFISP+T SISVTL NIIQKNFPEEYAERKS
Sbjct: 167 TTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISPRTCSISVTLNNIIQKNFPEEYAERKS 226

Query: 181 EHDSLTNLGVDLMPLFVMDVVLPCQKMSLNIFEPRYRLMVRRIMEGNHRMGMV 339
           EHD LTN GVDL+PLFVMD V+PCQK  L+IFEPRYRLMVRRIMEGNHRMGMV
Sbjct: 227 EHDCLTNFGVDLIPLFVMDAVIPCQKFPLHIFEPRYRLMVRRIMEGNHRMGMV 279


Top