BLASTX nr result

ID: Coptis25_contig00041996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041996
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514350.1| ATP-binding cassette transporter, putative [...   186   2e-45
ref|XP_003571582.1| PREDICTED: putative pleiotropic drug resista...   184   8e-45
ref|XP_002514349.1| ATP-binding cassette transporter, putative [...   181   5e-44
sp|O24367.1|TUR2_SPIPO RecName: Full=Pleiotropic drug resistance...   179   2e-43
ref|XP_002451754.1| hypothetical protein SORBIDRAFT_04g007270 [S...   179   3e-43

>ref|XP_002514350.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223546806|gb|EEF48304.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1449

 Score =  186 bits (471), Expect = 2e-45
 Identities = 86/127 (67%), Positives = 106/127 (83%)
 Frame = +2

Query: 2   ISKKEMFKACLEREWLLMKRNSIVHISQMVQLVVVAFIATTLFLRTKLKHNTVDDGIVLM 181
           +SKKE+FKAC+ RE+LLMKRNS V+I +M QL+++ FI  TLFLRT++  NT  DG V +
Sbjct: 498 VSKKELFKACISREYLLMKRNSFVYIFKMTQLIILGFITMTLFLRTEMHRNTETDGGVYL 557

Query: 182 GAMFFATVTILFSGFAELAMTIEKLPVFYKQRDLLFYPSWAYALPTWLLKIPISFSGVFL 361
           GA+FF   TI+F+GF+ELAMTI KLPVFYKQRDLLFYPSWAYALPTW+LKIPI+F  V +
Sbjct: 558 GALFFTVTTIMFNGFSELAMTILKLPVFYKQRDLLFYPSWAYALPTWILKIPITFVEVAV 617

Query: 362 WVTVTYY 382
           WV +TYY
Sbjct: 618 WVVMTYY 624


>ref|XP_003571582.1| PREDICTED: putative pleiotropic drug resistance protein 7-like
           [Brachypodium distachyon]
          Length = 1450

 Score =  184 bits (466), Expect = 8e-45
 Identities = 85/127 (66%), Positives = 103/127 (81%)
 Frame = +2

Query: 2   ISKKEMFKACLEREWLLMKRNSIVHISQMVQLVVVAFIATTLFLRTKLKHNTVDDGIVLM 181
           ISK E+ KAC  REWLLMKRNS V+I ++VQL+++  IA T+FLRTK+   TV+DG++ M
Sbjct: 506 ISKMELLKACFSREWLLMKRNSFVYIFKLVQLIILGTIAMTVFLRTKMHRGTVEDGVIYM 565

Query: 182 GAMFFATVTILFSGFAELAMTIEKLPVFYKQRDLLFYPSWAYALPTWLLKIPISFSGVFL 361
           GAMF   VT LF+GFAELAM+I KLP+FYKQRDLLFYPSWAY LPTWLLKIPISF    +
Sbjct: 566 GAMFLGLVTHLFNGFAELAMSIAKLPIFYKQRDLLFYPSWAYGLPTWLLKIPISFLECAV 625

Query: 362 WVTVTYY 382
           W+ +TYY
Sbjct: 626 WICMTYY 632


>ref|XP_002514349.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223546805|gb|EEF48303.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1309

 Score =  181 bits (459), Expect = 5e-44
 Identities = 82/127 (64%), Positives = 106/127 (83%)
 Frame = +2

Query: 2   ISKKEMFKACLEREWLLMKRNSIVHISQMVQLVVVAFIATTLFLRTKLKHNTVDDGIVLM 181
           +SKKE+ KAC+ RE+LLMKRNS  +I +M+QL+++AFI  T+FLRT++  NTV+D  V  
Sbjct: 358 VSKKELLKACVSREFLLMKRNSFAYIFKMIQLIIMAFITMTIFLRTEMHRNTVEDAGVYF 417

Query: 182 GAMFFATVTILFSGFAELAMTIEKLPVFYKQRDLLFYPSWAYALPTWLLKIPISFSGVFL 361
           GA+FFA +TI+F+G +ELAMT+ KLPVFYKQRDLLFYPSW YALPTW+LKIPI+F  V +
Sbjct: 418 GALFFAVMTIMFNGLSELAMTVIKLPVFYKQRDLLFYPSWVYALPTWILKIPITFVEVAI 477

Query: 362 WVTVTYY 382
           WV +TYY
Sbjct: 478 WVILTYY 484


>sp|O24367.1|TUR2_SPIPO RecName: Full=Pleiotropic drug resistance protein TUR2;
           Short=Protein Turion 2 gi|1514643|emb|CAA94437.1|
           PDR5-like ABC transporter [Spirodela polyrhiza]
          Length = 1441

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/127 (66%), Positives = 102/127 (80%)
 Frame = +2

Query: 2   ISKKEMFKACLEREWLLMKRNSIVHISQMVQLVVVAFIATTLFLRTKLKHNTVDDGIVLM 181
           ISK E+ KAC++REWLLMKRNS V+I ++VQL+V+A IA T+F RTKL  N ++D  +  
Sbjct: 504 ISKMELLKACIDREWLLMKRNSFVYIFKVVQLIVLALIAMTVFFRTKLPRNGLEDATIFF 563

Query: 182 GAMFFATVTILFSGFAELAMTIEKLPVFYKQRDLLFYPSWAYALPTWLLKIPISFSGVFL 361
           GAMF   VT LF+GFAELAM+I KLPVFYKQRDLLFYP WAYALPTW+LKIPISF    +
Sbjct: 564 GAMFLGLVTHLFNGFAELAMSIAKLPVFYKQRDLLFYPPWAYALPTWILKIPISFVECGV 623

Query: 362 WVTVTYY 382
           W+ +TYY
Sbjct: 624 WIAMTYY 630


>ref|XP_002451754.1| hypothetical protein SORBIDRAFT_04g007270 [Sorghum bicolor]
           gi|241931585|gb|EES04730.1| hypothetical protein
           SORBIDRAFT_04g007270 [Sorghum bicolor]
          Length = 1440

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/127 (65%), Positives = 102/127 (80%)
 Frame = +2

Query: 2   ISKKEMFKACLEREWLLMKRNSIVHISQMVQLVVVAFIATTLFLRTKLKHNTVDDGIVLM 181
           ISK E+ KAC  REWLLMKRNS V+I ++VQL+++  IA T+FLRT +    V+DG++ +
Sbjct: 499 ISKMELLKACFSREWLLMKRNSFVYIFKVVQLIILGTIAMTVFLRTTMHRRGVEDGVIFL 558

Query: 182 GAMFFATVTILFSGFAELAMTIEKLPVFYKQRDLLFYPSWAYALPTWLLKIPISFSGVFL 361
           GAMF   VT LF+GFAELAM+I KLP+FYKQRDLLFYPSWAYALPTWLLKIPISF    +
Sbjct: 559 GAMFLGLVTHLFNGFAELAMSIAKLPIFYKQRDLLFYPSWAYALPTWLLKIPISFLECAV 618

Query: 362 WVTVTYY 382
           W+ +TYY
Sbjct: 619 WIGMTYY 625


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