BLASTX nr result

ID: Coptis25_contig00041985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041985
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60821.1| hypothetical protein VITISV_035076 [Vitis vinifera]    59   5e-07
ref|XP_002272734.2| PREDICTED: NAC domain-containing protein 21/...    58   9e-07
emb|CBI37132.3| unnamed protein product [Vitis vinifera]               58   9e-07

>emb|CAN60821.1| hypothetical protein VITISV_035076 [Vitis vinifera]
          Length = 257

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   KGKEELTSKKCLEYDIDDAIIGTSSPNYSSSPPVDKFMPAGSQQINSVPQCSYYHSNNPS 181
           K K E +SK   +Y  D      ++ + SS P  D+ +P G QQI S      + +++ +
Sbjct: 132 KTKSESSSKLSPQYVFD------TTASASSPPTHDQTLPCGYQQIPSFSPTHPHQNHDQT 185

Query: 182 TMLNLTALNPTFIELPREE---CDALSNENRSETGDE---FLYDMILENGVLGMTGSSSF 343
           T+LNL  LNP  +    +E   C A +  N   +G +   FL+DM    G      SS+ 
Sbjct: 186 TLLNLAVLNPNLVHFASQEMNPCAAANEXNSKGSGADEYGFLWDMSCSLG--DGVPSSNL 243

Query: 344 EEMTFEDDDRLMFL 385
           E+M FE+++ ++FL
Sbjct: 244 EDMRFEENNSIVFL 257


>ref|XP_002272734.2| PREDICTED: NAC domain-containing protein 21/22 [Vitis vinifera]
          Length = 329

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   KGKEELTSKKCLEYDIDDAIIGTSSPNYSSSPPVDKFMPAGSQQINSVPQCSYYHSNNPS 181
           K K E +SK   +Y  D      ++ + SS P  D+ +P G QQI S      + +++ +
Sbjct: 204 KTKSESSSKLSPQYVFD------TTASASSPPTHDQTLPCGYQQIPSFSPTHPHQNHDQT 257

Query: 182 TMLNLTALNPTFIELPREE---CDALSNENRSETGDE---FLYDMILENGVLGMTGSSSF 343
           T+LNL  LNP  +    +E   C A +  N   +G +   FL+DM    G      SS+ 
Sbjct: 258 TLLNLAVLNPNLVHFASQEMNPCAAANEINSKGSGADEYGFLWDMSCSLG--DGVPSSNL 315

Query: 344 EEMTFEDDDRLMFL 385
           E+M FE+++ ++FL
Sbjct: 316 EDMRFEENNSIVFL 329


>emb|CBI37132.3| unnamed protein product [Vitis vinifera]
          Length = 281

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 6/134 (4%)
 Frame = +2

Query: 2   KGKEELTSKKCLEYDIDDAIIGTSSPNYSSSPPVDKFMPAGSQQINSVPQCSYYHSNNPS 181
           K K E +SK   +Y  D      ++ + SS P  D+ +P G QQI S      + +++ +
Sbjct: 156 KTKSESSSKLSPQYVFD------TTASASSPPTHDQTLPCGYQQIPSFSPTHPHQNHDQT 209

Query: 182 TMLNLTALNPTFIELPREE---CDALSNENRSETGDE---FLYDMILENGVLGMTGSSSF 343
           T+LNL  LNP  +    +E   C A +  N   +G +   FL+DM    G      SS+ 
Sbjct: 210 TLLNLAVLNPNLVHFASQEMNPCAAANEINSKGSGADEYGFLWDMSCSLG--DGVPSSNL 267

Query: 344 EEMTFEDDDRLMFL 385
           E+M FE+++ ++FL
Sbjct: 268 EDMRFEENNSIVFL 281


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