BLASTX nr result

ID: Coptis25_contig00041977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041977
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|2...   335   4e-90
ref|XP_002519706.1| DNA replication licensing factor MCM3, putat...   334   9e-90
ref|XP_003608493.1| DNA replication licensing factor MCM3-like p...   331   6e-89
gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum s...   330   9e-89
ref|XP_004134560.1| PREDICTED: DNA replication licensing factor ...   330   2e-88

>ref|XP_002305335.1| predicted protein [Populus trichocarpa] gi|222848299|gb|EEE85846.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  335 bits (859), Expect = 4e-90
 Identities = 168/181 (92%), Positives = 178/181 (98%)
 Frame = -2

Query: 615 SAPGQLPRTVDVIVEDDLVDGCKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSL 436
           SAPGQLPRTVDVIVEDDLVD CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNVSL
Sbjct: 195 SAPGQLPRTVDVIVEDDLVDCCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSL 254

Query: 435 LNKEANAPNYTTDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKN 256
           LNKEANAP Y+ +DLKNI+KIAER+DAF+LLGNSLAPSIYGHSWIKKAV+LLMLGG+EKN
Sbjct: 255 LNKEANAPIYSPEDLKNIKKIAERDDAFDLLGNSLAPSIYGHSWIKKAVVLLMLGGVEKN 314

Query: 255 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 76
           LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET
Sbjct: 315 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 374

Query: 75  G 73
           G
Sbjct: 375 G 375


>ref|XP_002519706.1| DNA replication licensing factor MCM3, putative [Ricinus communis]
           gi|223541123|gb|EEF42679.1| DNA replication licensing
           factor MCM3, putative [Ricinus communis]
          Length = 769

 Score =  334 bits (856), Expect = 9e-90
 Identities = 166/181 (91%), Positives = 178/181 (98%)
 Frame = -2

Query: 615 SAPGQLPRTVDVIVEDDLVDGCKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSL 436
           SAPGQLPRTVD+IVEDDLVD CKPGDRVAIVG+YKALPG+S+GSVNGVFRT++IANNVSL
Sbjct: 198 SAPGQLPRTVDIIVEDDLVDSCKPGDRVAIVGIYKALPGRSKGSVNGVFRTVVIANNVSL 257

Query: 435 LNKEANAPNYTTDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKN 256
           LNKEANAP Y+ +DLKNI+KIAER+DAF+LLGNSLAPSIYGHSWIKKAVILLMLGG+EKN
Sbjct: 258 LNKEANAPIYSPEDLKNIKKIAERDDAFDLLGNSLAPSIYGHSWIKKAVILLMLGGVEKN 317

Query: 255 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 76
           LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET
Sbjct: 318 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 377

Query: 75  G 73
           G
Sbjct: 378 G 378


>ref|XP_003608493.1| DNA replication licensing factor MCM3-like protein [Medicago
           truncatula] gi|355509548|gb|AES90690.1| DNA replication
           licensing factor MCM3-like protein [Medicago truncatula]
          Length = 773

 Score =  331 bits (849), Expect = 6e-89
 Identities = 165/181 (91%), Positives = 176/181 (97%)
 Frame = -2

Query: 615 SAPGQLPRTVDVIVEDDLVDGCKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSL 436
           SAPGQLPRTVD+I EDDLVD CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNVSL
Sbjct: 203 SAPGQLPRTVDIIAEDDLVDSCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVSL 262

Query: 435 LNKEANAPNYTTDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKN 256
           LNKEANAP Y+ +DLKNI+KIAER+D F+LLGNSLAPSI+GHSWIKKAVILLMLGG+EKN
Sbjct: 263 LNKEANAPIYSPEDLKNIKKIAERDDTFDLLGNSLAPSIHGHSWIKKAVILLMLGGVEKN 322

Query: 255 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 76
           LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET
Sbjct: 323 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 382

Query: 75  G 73
           G
Sbjct: 383 G 383


>gb|AAN73053.2| mini-chromosome maintenance protein MCM3 [Pisum sativum]
          Length = 710

 Score =  330 bits (847), Expect = 9e-89
 Identities = 165/181 (91%), Positives = 176/181 (97%)
 Frame = -2

Query: 615 SAPGQLPRTVDVIVEDDLVDGCKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSL 436
           SAPGQLPRTVDVI EDDLVD CKPGDRVAIVG+YKALPGKS+GSVNGVFRT+LIANNV+L
Sbjct: 136 SAPGQLPRTVDVIAEDDLVDSCKPGDRVAIVGIYKALPGKSKGSVNGVFRTVLIANNVAL 195

Query: 435 LNKEANAPNYTTDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKN 256
           LNKEANAP Y+T+DLKNI+KIAER+D F+LLGNSLAPSI+GHSWIKKAVILLML G+EKN
Sbjct: 196 LNKEANAPIYSTEDLKNIKKIAERDDTFDLLGNSLAPSIHGHSWIKKAVILLMLSGVEKN 255

Query: 255 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 76
           LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET
Sbjct: 256 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 315

Query: 75  G 73
           G
Sbjct: 316 G 316


>ref|XP_004134560.1| PREDICTED: DNA replication licensing factor MCM3 homolog 1-like
           [Cucumis sativus] gi|449505920|ref|XP_004162604.1|
           PREDICTED: DNA replication licensing factor MCM3 homolog
           1-like [Cucumis sativus]
          Length = 771

 Score =  330 bits (845), Expect = 2e-88
 Identities = 164/181 (90%), Positives = 176/181 (97%)
 Frame = -2

Query: 615 SAPGQLPRTVDVIVEDDLVDGCKPGDRVAIVGVYKALPGKSQGSVNGVFRTILIANNVSL 436
           SAPGQLPRTVDV+VEDDLVD CKPGDRVAIVG+YKALPGKS+GS+NGVFRT+L+ANNVSL
Sbjct: 203 SAPGQLPRTVDVVVEDDLVDCCKPGDRVAIVGIYKALPGKSKGSLNGVFRTVLVANNVSL 262

Query: 435 LNKEANAPNYTTDDLKNIRKIAEREDAFELLGNSLAPSIYGHSWIKKAVILLMLGGMEKN 256
           LNKEANAP Y+ +DLKNI+KIAER+D F+LLGNSLAPSIYGHSWIKKAVILLML G+EKN
Sbjct: 263 LNKEANAPIYSPEDLKNIKKIAERDDTFDLLGNSLAPSIYGHSWIKKAVILLMLSGVEKN 322

Query: 255 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 76
           LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET
Sbjct: 323 LKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQET 382

Query: 75  G 73
           G
Sbjct: 383 G 383


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