BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041966
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74388.1| hypothetical protein VITISV_041876 [Vitis vinifera]    63   2e-08
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    63   3e-08
emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]    62   4e-08
emb|CAN66185.1| hypothetical protein VITISV_025185 [Vitis vinifera]    62   5e-08
emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]    62   6e-08

>emb|CAN74388.1| hypothetical protein VITISV_041876 [Vitis vinifera]
          Length = 874

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
 Frame = -3

Query: 319 CEHCGRTNHSADFCWDITGRPPLHKANNATVVDQKVTDFQRVQEDFAALMKRIQAIPSSS 140
           C +C +  H+ D C+ + GRPP       T V Q  +D Q  Q   ++  + I       
Sbjct: 83  CTYCNKLGHTRDRCYQLHGRPP-----RTTHVAQS-SDPQSPQPPNSSTSQGI------- 129

Query: 139 SLSDYPTATLADSGK--TCL-HTSGNNSWVIDSGASDHMIGNLQLFSSL 2
           SL+D   A++A  G   TCL HTS    W++DSGASDH+ GN  LFSS+
Sbjct: 130 SLTDTSIASVAQIGNASTCLTHTSSLEPWILDSGASDHISGNKDLFSSI 178


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
 Frame = -3

Query: 319 CEHCGRTNHSADFCWDITGRPPLHKANNATV------VDQKVTDFQRVQEDFAALMKRIQ 158
           C+HCGR  H  D C+ + GRPP   A   T       VD    D       F   +K  +
Sbjct: 268 CDHCGRLGHKIDRCYALHGRPPKSVAVAQTAPVQPSTVDHTSIDTPGHPAIFNEFLKWYE 327

Query: 157 AIPSSSSLSDYPTATLADSGKT---CLHTSGNNSWVIDSGASDHMIGNLQLFSSL 2
              +S S     TA++A SG +     H++    WV+DSGA+DH+ GN   FSSL
Sbjct: 328 DRQNSGS-----TASVAHSGTSFAGLTHSTSLGPWVLDSGATDHITGNQSFFSSL 377


>emb|CAN70260.1| hypothetical protein VITISV_002223 [Vitis vinifera]
          Length = 956

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
 Frame = -3

Query: 319 CEHCGRTNHSADFCWDITGRPPLHKANNATVVDQKVTDFQRVQEDFAALMKRIQAIPSSS 140
           C +C +  H+ D C+ + GRPP       T    +  DF   Q             P SS
Sbjct: 266 CTYCNKLGHTRDRCYQLHGRPP------RTAHVAQSFDFPLPQ-------------PPSS 306

Query: 139 SLSDYPTATLADSGKT--CL-HTSGNNSWVIDSGASDHMIGNLQLFSSL 2
           S S    A++A  G    CL HTS    W++DSGASDH+ GN  LFSS+
Sbjct: 307 SASQASVASVAQPGNVSACLTHTSSLGPWILDSGASDHLSGNKDLFSSI 355


>emb|CAN66185.1| hypothetical protein VITISV_025185 [Vitis vinifera]
          Length = 676

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
 Frame = -3

Query: 319 CEHCGRTNHSADFCWDITGRPPLHKANNATVVDQKVTDFQRVQEDFAALMKRIQAIPSSS 140
           C +C +  H+ D C+ + GRPP   A+ A   D  +                    P SS
Sbjct: 163 CTYCNKLGHTRDRCYQLHGRPP-RTAHVAQSSDSPLPQ------------------PPSS 203

Query: 139 SLSDYPTATLADSGKTCL---HTSGNNSWVIDSGASDHMIGNLQLFSSL 2
           S S    A++A  G       HTS   SW++DSGASDH+ GN  LFSS+
Sbjct: 204 SASQASVASVAQPGNVSAYLTHTSSLGSWILDSGASDHLSGNKYLFSSI 252


>emb|CAN67317.1| hypothetical protein VITISV_019719 [Vitis vinifera]
          Length = 1240

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/112 (34%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
 Frame = -3

Query: 319 CEHCGRTNHSADFCWDITGRPPLHKANNATVVDQKVTDFQRVQEDFAALMKRIQAIPSSS 140
           C +C +  H+ D C+ + GRPP   A+ A   D  +                    P SS
Sbjct: 255 CTYCNKLGHTRDRCYQLHGRPP-RTAHMAQSSDSPLPQ------------------PPSS 295

Query: 139 SLSDYPTATLAD-----SGKTCL-HTSGNNSWVIDSGASDHMIGNLQLFSSL 2
           S S    A++A      +  TCL HTS    W++DSGASDH+ GN  LFSS+
Sbjct: 296 SASQTSQASIASVAQLGNASTCLTHTSSLRPWILDSGASDHLSGNKDLFSSI 347