BLASTX nr result

ID: Coptis25_contig00041932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041932
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274384.2| PREDICTED: putative zinc finger protein CONS...   125   5e-27
ref|NP_001241023.1| zinc finger protein CONSTANS-LIKE 12-like [G...   119   2e-25
ref|XP_003597033.1| CONSTANS-like zinc finger protein [Medicago ...   115   4e-24
ref|XP_003543378.1| PREDICTED: putative zinc finger protein CONS...   115   5e-24
ref|XP_002515725.1| conserved hypothetical protein [Ricinus comm...   114   6e-24

>ref|XP_002274384.2| PREDICTED: putative zinc finger protein CONSTANS-LIKE 11-like
           [Vitis vinifera]
          Length = 448

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/107 (54%), Positives = 73/107 (68%)
 Frame = +1

Query: 7   QGVNSRMSQVLPNPTCNRNLNIAFPIGQLNPXXXXXXXXXXXXXXAGDYQDCGVSPIFLP 186
           + ++  +  +L NP+C+R + + FP GQ++               A DYQDCG+SP FL 
Sbjct: 316 EAMSGSVGCMLVNPSCSRKMGLGFPGGQVHASVSLSLSNVTGESSAADYQDCGLSPAFLA 375

Query: 187 GEPPWDTNLETGCPQARDQAKMRYKEKKKNRTFGKQIRYASRKARAD 327
           GE PW +NL+  CPQARD+AKMRY EKKK RTFGKQIRYASRKARAD
Sbjct: 376 GESPWTSNLDAHCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARAD 422


>ref|NP_001241023.1| zinc finger protein CONSTANS-LIKE 12-like [Glycine max]
           gi|260513724|gb|ACX42574.1| CONSTANS-like zinc finger
           protein [Glycine max]
          Length = 418

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/107 (54%), Positives = 72/107 (67%)
 Frame = +1

Query: 7   QGVNSRMSQVLPNPTCNRNLNIAFPIGQLNPXXXXXXXXXXXXXXAGDYQDCGVSPIFLP 186
           Q +NS  +  L NP+C RN+++ FP G ++               + +YQDC  S +FLP
Sbjct: 287 QVINSNTNSALMNPSCTRNISLGFPQG-VHSKMPLQFPNIVGENNSTEYQDCRFSQVFLP 345

Query: 187 GEPPWDTNLETGCPQARDQAKMRYKEKKKNRTFGKQIRYASRKARAD 327
           GE PW++NLE  CPQARD+AKMRY EKKK R FGKQIRYASRKARAD
Sbjct: 346 GESPWESNLEGTCPQARDKAKMRYNEKKKTRMFGKQIRYASRKARAD 392


>ref|XP_003597033.1| CONSTANS-like zinc finger protein [Medicago truncatula]
           gi|355486081|gb|AES67284.1| CONSTANS-like zinc finger
           protein [Medicago truncatula]
          Length = 469

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/109 (50%), Positives = 70/109 (64%)
 Frame = +1

Query: 1   MTQGVNSRMSQVLPNPTCNRNLNIAFPIGQLNPXXXXXXXXXXXXXXAGDYQDCGVSPIF 180
           + QG N+  +  L  P+CNR++ + FP  Q +                 +  DCG+ P+F
Sbjct: 336 LMQGFNNSANCALMPPSCNRSMPLEFPQSQTHSGISIQLPNINGESNVAELLDCGLPPVF 395

Query: 181 LPGEPPWDTNLETGCPQARDQAKMRYKEKKKNRTFGKQIRYASRKARAD 327
            PGE  W++NLE  CPQARD+AKMRY+EKKK RTFGKQIRYASRKARAD
Sbjct: 396 HPGESHWESNLEGACPQARDKAKMRYQEKKKTRTFGKQIRYASRKARAD 444


>ref|XP_003543378.1| PREDICTED: putative zinc finger protein CONSTANS-LIKE 11-like
           [Glycine max]
          Length = 416

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/107 (52%), Positives = 72/107 (67%)
 Frame = +1

Query: 7   QGVNSRMSQVLPNPTCNRNLNIAFPIGQLNPXXXXXXXXXXXXXXAGDYQDCGVSPIFLP 186
           Q +NS  +  L NP+C +N+++ FP G ++               + +YQDCG+S +   
Sbjct: 287 QVINSNTNCALMNPSCTKNISLGFPQGLVHSNMPLQFPNIVGENNSTEYQDCGLSRV--- 343

Query: 187 GEPPWDTNLETGCPQARDQAKMRYKEKKKNRTFGKQIRYASRKARAD 327
           GE PW++NLE  CPQARD+AKMRY EKKK RTFGKQIRYASRKARAD
Sbjct: 344 GESPWESNLEGTCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARAD 390


>ref|XP_002515725.1| conserved hypothetical protein [Ricinus communis]
           gi|223545162|gb|EEF46672.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
 Frame = +1

Query: 7   QGVNSRMSQVLPNPTCNRNLNIAFPIG--QLNPXXXXXXXXXXXXXXAGDYQDCGVSPIF 180
           Q +N   +    NP+C+R++N+ +P+   Q++               A DYQDCG+SP+F
Sbjct: 283 QPINGGSNCSYMNPSCSRSINLGYPVPPVQVHSSISLSLSNITGESSAADYQDCGLSPMF 342

Query: 181 LPGEPPWDTNLETGCPQARDQAKMRYKEKKKNRTFGKQIRYASRKARAD 327
           L  E  WD  ++T CPQARD+AKMRY EKKK RTF KQIRYASRKARAD
Sbjct: 343 LASETRWDLGMDTSCPQARDKAKMRYNEKKKTRTFSKQIRYASRKARAD 391


Top