BLASTX nr result

ID: Coptis25_contig00041931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041931
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = -1

Query: 255 VFVHKCLHWVAID*ISG--NGVPVIVLFNLAVDEFGSVPTPGSHLFKPAKGCYSLGVLEG 82
           VF +  +HW A     G  NG  +IV F+L  +EF  +P P    +   +   ++GVL G
Sbjct: 216 VFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPD---YSSNEHEMNVGVLGG 272

Query: 81  NLSVVECTSESNVGIWVMKKYGVKESW 1
            L V    +   V IWVMK+YGVKESW
Sbjct: 273 CLCVFCNKNCKQVEIWVMKEYGVKESW 299


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