BLASTX nr result

ID: Coptis25_contig00041925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041925
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [S...   181   4e-44
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   181   4e-44
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   181   6e-44
tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea m...   181   7e-44
ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839...   179   2e-43

>ref|XP_002447039.1| hypothetical protein SORBIDRAFT_06g027382 [Sorghum bicolor]
            gi|241938222|gb|EES11367.1| hypothetical protein
            SORBIDRAFT_06g027382 [Sorghum bicolor]
          Length = 1625

 Score =  181 bits (460), Expect = 4e-44
 Identities = 81/123 (65%), Positives = 100/123 (81%)
 Frame = +2

Query: 2    QNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWKK 181
            ++++ ++   + P FD  KH +LCSELKQLYVAITRTRQRLWICEN +++  PMFDYWKK
Sbjct: 1497 RDVMSTSEVISHPGFDRNKHYLLCSELKQLYVAITRTRQRLWICENADDYCQPMFDYWKK 1556

Query: 182  LFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMCFERAGDSYREKWARA 361
            L +V+ R LD SL QAMQ  SS ++W LRG KLFNEG FE+ATMCFE+AGD+Y+EKWARA
Sbjct: 1557 LCIVEVRLLDSSLIQAMQTGSSADDWRLRGTKLFNEGQFEMATMCFEKAGDAYKEKWARA 1616

Query: 362  AGL 370
            AGL
Sbjct: 1617 AGL 1619


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/123 (68%), Positives = 104/123 (84%)
 Frame = +2

Query: 2    QNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWKK 181
            QN+L+++S ++FP+F+  +HN+LCSELKQLYVAITRTRQRLWICEN  EF+ P+FDYW+K
Sbjct: 1626 QNLLDASSPQSFPTFNPARHNVLCSELKQLYVAITRTRQRLWICENAAEFAKPIFDYWRK 1685

Query: 182  LFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMCFERAGDSYREKWARA 361
              +VQ RKLD+SLA AMQVASS EEW  +G KL  E N+E+ATMCFERAGD+Y EK A+A
Sbjct: 1686 KAVVQVRKLDNSLALAMQVASSPEEWKSQGYKLLREANYEMATMCFERAGDAYGEKLAKA 1745

Query: 362  AGL 370
            AGL
Sbjct: 1746 AGL 1748


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  181 bits (459), Expect = 6e-44
 Identities = 88/122 (72%), Positives = 102/122 (83%)
 Frame = +2

Query: 2    QNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWKK 181
            Q++L++ S  +FPSF   KHN+LCSELKQLYVAITRTRQRLWICEN+EEFS PMFDYW K
Sbjct: 1453 QDLLDANSP-SFPSFIPAKHNVLCSELKQLYVAITRTRQRLWICENVEEFSRPMFDYWTK 1511

Query: 182  LFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMCFERAGDSYREKWARA 361
              LVQ RKLDDSLAQAMQV+SS EEW  +G KL  EGN+E+ATMCFERAGD + EK ++A
Sbjct: 1512 KGLVQVRKLDDSLAQAMQVSSSPEEWKSQGYKLLREGNYEMATMCFERAGDEHGEKLSKA 1571

Query: 362  AG 367
            AG
Sbjct: 1572 AG 1573


>tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
          Length = 2606

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/123 (66%), Positives = 98/123 (79%)
 Frame = +2

Query: 2    QNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWKK 181
            +++  S+   + P FD  KH +LCSELKQLYVAITRTRQRLWICEN +++  PMFDYWKK
Sbjct: 1541 RDVTSSSEVISHPGFDRNKHYLLCSELKQLYVAITRTRQRLWICENADDYCQPMFDYWKK 1600

Query: 182  LFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMCFERAGDSYREKWARA 361
            L +V+ R LD SL QAMQ  SS ++W LRG KLFNEG FE+ATMCFE+AGD+YRE WARA
Sbjct: 1601 LCIVEVRLLDSSLIQAMQTGSSTDDWRLRGTKLFNEGQFEMATMCFEKAGDAYRENWARA 1660

Query: 362  AGL 370
            AGL
Sbjct: 1661 AGL 1663


>ref|XP_003581606.1| PREDICTED: uncharacterized protein LOC100839489 [Brachypodium
           distachyon]
          Length = 1806

 Score =  179 bits (455), Expect = 2e-43
 Identities = 82/123 (66%), Positives = 99/123 (80%)
 Frame = +2

Query: 2   QNMLESTSTRTFPSFDETKHNILCSELKQLYVAITRTRQRLWICENMEEFSMPMFDYWKK 181
           +N++  +   + P FD +KH +LCSELKQLYVAITRTRQRLWICEN ++   PMFDYWKK
Sbjct: 616 RNIIAQSEEVSHPDFDRSKHYLLCSELKQLYVAITRTRQRLWICENTDDHCRPMFDYWKK 675

Query: 182 LFLVQTRKLDDSLAQAMQVASSKEEWSLRGVKLFNEGNFEVATMCFERAGDSYREKWARA 361
           L LV+ R LD SL QAMQ  SS ++W LRG KLFNEG F++ATMCFE+AGD++REKWARA
Sbjct: 676 LCLVEVRLLDSSLVQAMQTGSSTDDWRLRGTKLFNEGQFKMATMCFEKAGDAHREKWARA 735

Query: 362 AGL 370
           AGL
Sbjct: 736 AGL 738


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