BLASTX nr result

ID: Coptis25_contig00041924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041924
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18040.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002267365.1| PREDICTED: uncharacterized protein LOC100267...   105   3e-21
emb|CAN62016.1| hypothetical protein VITISV_029571 [Vitis vinifera]    72   4e-11
ref|XP_002262668.1| PREDICTED: serine/threonine-protein phosphat...    62   6e-08
dbj|BAF01410.1| hypothetical protein [Arabidopsis thaliana]            60   2e-07

>emb|CBI18040.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  142 bits (357), Expect = 4e-32
 Identities = 61/106 (57%), Positives = 81/106 (76%)
 Frame = +3

Query: 3   PNDSGTVDSRYLLLLKNLERVPQFAWGKAVLDDLFEWIYRYKSEELRYMGGCLIFLQMWS 182
           PN +G VDSRYL +LK+L+ V Q AWG AVL+D+ +W+ + K   ++Y+G CLIFLQ+WS
Sbjct: 167 PNANGKVDSRYLSVLKDLDNVHQLAWGAAVLEDIIKWLSKKKEMNVQYVGSCLIFLQIWS 226

Query: 183 FEHIDVGRPGLTSCNLTFPRSTRWQNSSSRRREWFTTKFEELQGNQ 320
           +EHID+ RP L  C LTFPR+ RW+N  S +R+W TTKF+ELQ NQ
Sbjct: 227 YEHIDIARPSLLDCYLTFPRACRWENCRSHQRKWITTKFKELQENQ 272


>ref|XP_002267365.1| PREDICTED: uncharacterized protein LOC100267140 [Vitis vinifera]
          Length = 464

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/112 (46%), Positives = 64/112 (57%)
 Frame = +3

Query: 3   PNDSGTVDSRYLLLLKNLERVPQFAWGKAVLDDLFEWIYRYKSEELRYMGGCLIFLQMWS 182
           PN +G VDSRYL +LK+L+ V Q AWG A+                            WS
Sbjct: 167 PNANGKVDSRYLSVLKDLDNVHQLAWGAAI----------------------------WS 198

Query: 183 FEHIDVGRPGLTSCNLTFPRSTRWQNSSSRRREWFTTKFEELQGNQIVWRLQ 338
           +EHID+ RP L  C LTFPR+ RW+N  S +R+W TTKF+ELQ NQI W LQ
Sbjct: 199 YEHIDIARPSLLDCYLTFPRACRWENCRSHQRKWITTKFKELQENQITWELQ 250


>emb|CAN62016.1| hypothetical protein VITISV_029571 [Vitis vinifera]
          Length = 443

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
 Frame = +3

Query: 3   PNDSGTVDSRYLLLLKNLERVPQFAWGKAVLDDLFEWIYRYKSEELRYMGGCLIFLQM-W 179
           PN +G VDSRYL +LK+L+ V Q AWG AVL+D+ +W+ + K   ++Y+G CLIFLQ+ W
Sbjct: 167 PNANGKVDSRYLSVLKDLDNVHQLAWGAAVLEDIIKWLSKKKEMNVQYVGSCLIFLQITW 226

Query: 180 SFE 188
             +
Sbjct: 227 ELQ 229


>ref|XP_002262668.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Vitis vinifera] gi|296090639|emb|CBI41033.3| unnamed
           protein product [Vitis vinifera]
          Length = 630

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
 Frame = +3

Query: 33  YLLLLKNLERVPQFAWGKAVLDDLFEWIYRYKSEELRYMGGCLIFLQMWSFEHIDVGRPG 212
           YL L +N ++   +AWG A L  L+  +     +    + GCL  LQ WS+ H+D+GRP 
Sbjct: 200 YLPLFENFDQASNYAWGAAALSFLYRALGNASLKSQSTVSGCLTLLQCWSYYHLDIGRPR 259

Query: 213 LT--SCNLTFPRSTRWQNSSS-----RRREWFTTKFEELQGNQIVW 329
           L   S +++FP   +W+   S     R   ++    + L+ + + W
Sbjct: 260 LNQDSIHVSFPLVLKWKGKQSGPTANRDLIFYRKALDSLKSSDVEW 305


>dbj|BAF01410.1| hypothetical protein [Arabidopsis thaliana]
          Length = 509

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
 Frame = +3

Query: 9   DSGTVDSRYLLLLKNLERVPQFAWGKAVLDDLFEWIYRYKSEELRYMGGCLIFLQMWSFE 188
           D   V  +YL L ++ ++  ++AWG A L  L+  +     +    + GCL  LQ WS+ 
Sbjct: 193 DGDKVSVKYLPLFEDFDQAGRYAWGAAALACLYRALGNASLKSQSNICGCLTLLQCWSYF 252

Query: 189 HIDVGRPGLTSCNLTFPRSTRWQNSSSRRR---EWFTTKFEELQGNQIVW 329
           H+D+GRP        FP +  W+   SR +     +  + ++L  ++I W
Sbjct: 253 HLDIGRP--EKSEACFPLALLWKGKGSRSKTDLSEYRRELDDLDPSKITW 300


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