BLASTX nr result

ID: Coptis25_contig00041912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041912
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002328860.1| predicted protein [Populus trichocarpa] gi|222839290|gb|EEE77627.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +1

Query: 34  LALFVASCNGLVCLLSE-DRVCLLNPSTRECKIVNFGKNRCWHYGLTRGFGYDPITDNYK 210
           + LF+ SC+G+VC+L+E D V L NPSTRE K ++ G     H   + G GYD  TD+YK
Sbjct: 100 VGLFLGSCDGIVCILNEVDSVVLWNPSTRESKKLS-GPTSSLHKDFSTGLGYDSSTDDYK 158

Query: 211 LV 216
           +V
Sbjct: 159 MV 160


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