BLASTX nr result

ID: Coptis25_contig00041907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041907
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243...    91   1e-16
ref|XP_002525015.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816...    86   4e-15
ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002309438.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>ref|XP_002277319.1| PREDICTED: uncharacterized protein LOC100243200 [Vitis vinifera]
           gi|147771778|emb|CAN66779.1| hypothetical protein
           VITISV_039550 [Vitis vinifera]
          Length = 141

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/96 (51%), Positives = 58/96 (60%)
 Frame = -1

Query: 441 NTNSSTSPRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXX 262
           + +S+  PRVVDSISCRQMYLRSYTFS+KETVPEKT KCF                    
Sbjct: 37  SVSSNRHPRVVDSISCRQMYLRSYTFSKKETVPEKTIKCFGRVKERVAHGRRRNKGEELH 96

Query: 261 XXXXXXXXRVKEISVAAFYSILNRLLSCSASVDVVD 154
                   +VKEIS +A Y+I  RLL C+ +VDVVD
Sbjct: 97  GKRFVVVRKVKEISCSALYAIFRRLLYCTTTVDVVD 132


>ref|XP_002525015.1| conserved hypothetical protein [Ricinus communis]
           gi|223535677|gb|EEF37342.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/91 (53%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -1

Query: 420 PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF-XXXXXXXXXXXXXXXXXXXXXXXXXX 244
           PRVVDSISCRQMYLRSYTFSRKE+VPE+TKKC                            
Sbjct: 55  PRVVDSISCRQMYLRSYTFSRKESVPERTKKCIGRVKEKVANHGKKIKEKGGRRRNKCLV 114

Query: 243 XXRVKEISVAAFYSILNRLLSCSASVDVVDH 151
             +VKE S  A + I +RLLSC ASVDVVDH
Sbjct: 115 FRKVKEFSCNALFRIFHRLLSCGASVDVVDH 145


>ref|XP_003542479.1| PREDICTED: uncharacterized protein LOC100816302 [Glycine max]
          Length = 140

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/88 (52%), Positives = 53/88 (60%)
 Frame = -1

Query: 420 PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCFXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           PRVVDSISCRQMYLRSY FSRKE+VPEKT+KCF                           
Sbjct: 49  PRVVDSISCRQMYLRSYKFSRKESVPEKTQKCFGRVKERVKKQGSSQHNHGVGRRKCLVW 108

Query: 240 XRVKEISVAAFYSILNRLLSCSASVDVV 157
            +++EIS AA + I +R LSC ASVDVV
Sbjct: 109 RKMREISCAALFRIFHRFLSCGASVDVV 136


>ref|XP_002323438.1| predicted protein [Populus trichocarpa] gi|222868068|gb|EEF05199.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/91 (50%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
 Frame = -1

Query: 420 PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF--XXXXXXXXXXXXXXXXXXXXXXXXX 247
           PRVVDSISCRQ+YLRSYTFSRKE++PEKTKKCF                           
Sbjct: 53  PRVVDSISCRQLYLRSYTFSRKESMPEKTKKCFGRVKEKVANHGKKRKDQIKGGRKRKCL 112

Query: 246 XXXRVKEISVAAFYSILNRLLSCSASVDVVD 154
              + KE+S +A + I +RLLSC+A+VDVVD
Sbjct: 113 VFRKAKEVSCSALFRIFHRLLSCTATVDVVD 143


>ref|XP_002309438.1| predicted protein [Populus trichocarpa] gi|222855414|gb|EEE92961.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/92 (50%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
 Frame = -1

Query: 420 PRVVDSISCRQMYLRSYTFSRKETVPEKTKKCF---XXXXXXXXXXXXXXXXXXXXXXXX 250
           PRVVDSISCRQMYLRSYTFSRKE++PEKTKKC                            
Sbjct: 53  PRVVDSISCRQMYLRSYTFSRKESMPEKTKKCLERVKEKVTSHGKKRKDHQVKGGRKGRC 112

Query: 249 XXXXRVKEISVAAFYSILNRLLSCSASVDVVD 154
                VKEIS +A + + +RLLSC+A+VDVV+
Sbjct: 113 LVFREVKEISCSALFRVFHRLLSCTATVDVVE 144


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