BLASTX nr result
ID: Coptis25_contig00041894
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041894 (500 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japo... 60 4e-12 ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [S... 47 8e-06 >gb|EEE68427.1| hypothetical protein OsJ_26794 [Oryza sativa Japonica Group] Length = 368 Score = 59.7 bits (143), Expect(3) = 4e-12 Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 18/119 (15%) Frame = -3 Query: 303 KEVLKKKLIPVKNTWF*QGVSIALDKWMNVKHEPLINITALNSRG--------------- 169 K ++ L VK+TW QGVSI D W ++K++PLIN+ A NSR Sbjct: 222 KRSVEHDLAIVKSTWCTQGVSIVSDGWTDIKNKPLINVIASNSREYVQADAASMEPIEWW 281 Query: 168 ---RHXXXXXXXXXXXXXXXXXXXXSAEKNWSTDSFIHNVNINMLNFGRADNMAFIYSN 1 SAE+ W T FIHN N LN AD + FI+SN Sbjct: 282 CSYGSETPELAEVAKRVLSQPISSSSAERIWGTYQFIHNAKRNKLNAANADKLVFIHSN 340 Score = 31.2 bits (69), Expect(3) = 4e-12 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = -1 Query: 440 LCANVMTINVLRNTLFHEMVSAIN 369 LCAN + N+LR+ F EMV+AIN Sbjct: 176 LCANGIPFNILRSPQFAEMVTAIN 199 Score = 24.3 bits (51), Expect(3) = 4e-12 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -2 Query: 358 GLQTPFYEKAITTFLDE*KRSFE 290 G + P EKA TT LD KRS E Sbjct: 204 GYKGPSSEKARTTLLDACKRSVE 226 >ref|XP_002450438.1| hypothetical protein SORBIDRAFT_05g005485 [Sorghum bicolor] gi|241936281|gb|EES09426.1| hypothetical protein SORBIDRAFT_05g005485 [Sorghum bicolor] Length = 313 Score = 47.4 bits (111), Expect(2) = 8e-06 Identities = 25/65 (38%), Positives = 37/65 (56%) Frame = -3 Query: 363 PKGYRLLFMKKQ*LLS*MSEKEVLKKKLIPVKNTWF*QGVSIALDKWMNVKHEPLINITA 184 PKGY+ +K + K ++ L V++TW QGVS+ D W N+K +PL+N+ A Sbjct: 194 PKGYKGPGSEKARTTLLDALKRNVENDLSTVRDTWLTQGVSVVSDGWTNIKGQPLLNVLA 253 Query: 183 LNSRG 169 NS G Sbjct: 254 SNSVG 258 Score = 26.9 bits (58), Expect(2) = 8e-06 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = -1 Query: 440 LCANVMTINVLRNTLFHEMVSAIN 369 + AN ++ NVLR+ + EMV+AIN Sbjct: 168 IAANGISFNVLRSPHYSEMVTAIN 191