BLASTX nr result
ID: Coptis25_contig00041891
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041891 (399 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 211 7e-53 emb|CBI29560.3| unnamed protein product [Vitis vinifera] 211 7e-53 emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 211 7e-53 ref|XP_002530602.1| pentatricopeptide repeat-containing protein,... 195 3e-48 ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 189 2e-46 >ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like [Vitis vinifera] Length = 719 Score = 211 bits (536), Expect = 7e-53 Identities = 98/132 (74%), Positives = 114/132 (86%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VSWNSMIVAYGQH+EG KAL +FQEM+ R NVDMFTLA VLTAFTC+ED GGLQFH + Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKYSE 39 LIK+G H+NSHVGSGL+DLYSKCG G+ +KVFEEI EPDLVLWNTM+SGYSQ E++ E Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325 Query: 38 DALDCFRRMQRV 3 DAL+CFR+MQ + Sbjct: 326 DALECFRQMQGI 337 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLK-ALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHA 222 V WN+M+ Y Q+ E L+ AL+ F++M + + + CV++A + + G Q H+ Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367 Query: 221 KLIKSGCHENS-HVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQ 57 +KS N V + L+ +YSKCG+ + A+++F+ + E + V N+MI+GY+Q Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGN-LQDARRLFDRMAEHNTVSLNSMIAGYAQ 422 Score = 60.1 bits (144), Expect = 2e-07 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 1/132 (0%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VS+N++I AY E AL +F M ++D FTL+ V+TA C +D Q H+ Sbjct: 106 VSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITA--CCDDVGLIGQLHSV 163 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIRE-PDLVLWNTMISGYSQKEKYS 42 + SG V + L+ Y K GD + AK+VF + D V WN+MI Y Q ++ S Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGD-LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222 Query: 41 EDALDCFRRMQR 6 + AL F+ M R Sbjct: 223 K-ALGLFQEMVR 233 >emb|CBI29560.3| unnamed protein product [Vitis vinifera] Length = 640 Score = 211 bits (536), Expect = 7e-53 Identities = 98/132 (74%), Positives = 114/132 (86%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VSWNSMIVAYGQH+EG KAL +FQEM+ R NVDMFTLA VLTAFTC+ED GGLQFH + Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKYSE 39 LIK+G H+NSHVGSGL+DLYSKCG G+ +KVFEEI EPDLVLWNTM+SGYSQ E++ E Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325 Query: 38 DALDCFRRMQRV 3 DAL+CFR+MQ + Sbjct: 326 DALECFRQMQGI 337 Score = 60.1 bits (144), Expect = 2e-07 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 1/132 (0%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VS+N++I AY E AL +F M ++D FTL+ V+TA C +D Q H+ Sbjct: 106 VSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITA--CCDDVGLIGQLHSV 163 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIRE-PDLVLWNTMISGYSQKEKYS 42 + SG V + L+ Y K GD + AK+VF + D V WN+MI Y Q ++ S Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGD-LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222 Query: 41 EDALDCFRRMQR 6 + AL F+ M R Sbjct: 223 K-ALGLFQEMVR 233 >emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] Length = 719 Score = 211 bits (536), Expect = 7e-53 Identities = 98/132 (74%), Positives = 114/132 (86%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VSWNSMIVAYGQH+EG KAL +FQEM+ R NVDMFTLA VLTAFTC+ED GGLQFH + Sbjct: 206 VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQ 265 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKYSE 39 LIK+G H+NSHVGSGL+DLYSKCG G+ +KVFEEI EPDLVLWNTM+SGYSQ E++ E Sbjct: 266 LIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLE 325 Query: 38 DALDCFRRMQRV 3 DAL+CFR+MQ + Sbjct: 326 DALECFRQMQGI 337 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLK-ALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHA 222 V WN+M+ Y Q+ E L+ AL+ F++M + + + CV++A + + G Q H+ Sbjct: 308 VLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS 367 Query: 221 KLIKSGCHENS-HVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQ 57 +KS N V + L+ +YSKCG+ + A+++F+ + E + V N+MI+GY+Q Sbjct: 368 LALKSDIPSNRISVDNALIAMYSKCGN-LQDARRLFDRMAEHNTVSLNSMIAGYAQ 422 Score = 60.8 bits (146), Expect = 1e-07 Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 1/132 (0%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VS+N++I AY E AL +F M ++D FTL+ V+TA C +D Q H+ Sbjct: 106 VSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITA--CCDDVGLIGQLHSV 163 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIRE-PDLVLWNTMISGYSQKEKYS 42 + SG V + L+ Y K GD + AK+VF + D V WN+MI Y Q ++ S Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGD-LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGS 222 Query: 41 EDALDCFRRMQR 6 + AL F+ M R Sbjct: 223 K-ALGLFQEMVR 233 >ref|XP_002530602.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223529850|gb|EEF31782.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 567 Score = 195 bits (496), Expect = 3e-48 Identities = 93/131 (70%), Positives = 108/131 (82%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VSWN+MIVAYG+ REG KAL++FQEM R +VDM+TLA VLTAFTC+ED GG QFHA Sbjct: 207 VSWNTMIVAYGRQREGFKALKLFQEMTHRGIDVDMYTLASVLTAFTCLEDLFGGFQFHAN 266 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKYSE 39 LIK+G + N HVGSGLVDLY+KCG G+L +K+F EIREPDLVLWNTMIS YS E+ SE Sbjct: 267 LIKTGFYRNCHVGSGLVDLYAKCGGGMLDCRKIFVEIREPDLVLWNTMISAYSLDEELSE 326 Query: 38 DALDCFRRMQR 6 + LDCFRRMQR Sbjct: 327 ETLDCFRRMQR 337 Score = 63.2 bits (152), Expect = 2e-08 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 2/116 (1%) Frame = -2 Query: 398 VSWNSMIVAYGQHRE-GLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHA 222 V WN+MI AY E + L F+ M F D + CV+ A + + G Q HA Sbjct: 309 VLWNTMISAYSLDEELSEETLDCFRRMQRAGFRPDDCSFVCVIRACSNLSSPSQGKQIHA 368 Query: 221 KLIKSGCHENS-HVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQ 57 +KS N V + LV +YSKCG+ + A+++F+ + E + V +N++I+GY+Q Sbjct: 369 MTVKSEIPSNQISVNNALVAMYSKCGN-LQDARRLFDRMPEHNTVSFNSIIAGYAQ 423 Score = 55.5 bits (132), Expect = 5e-06 Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 +S+N++I AY + L AL +F+EM ++D +TL+ V+TA C D Q H Sbjct: 106 ISYNTLITAYADCGDSLNALYLFREMRETGIDMDGYTLSGVITA--CCNDVNLIRQLHCL 163 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFE--EIREPDLVLWNTMISGYSQKEKY 45 G V + V Y K G + A++VF EI D V WNTMI Y +++ Sbjct: 164 AGNYGLDSYVSVKNSFVTYYGKNG-FLEEAERVFYGIEIENRDQVSWNTMIVAYG-RQRE 221 Query: 44 SEDALDCFRRM 12 AL F+ M Sbjct: 222 GFKALKLFQEM 232 >ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g49710-like [Cucumis sativus] Length = 720 Score = 189 bits (480), Expect = 2e-46 Identities = 92/132 (69%), Positives = 109/132 (82%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VSWNSM+VAY QHREG KAL+++ EM +R VD+FTLA VLTAFT V+D GGLQFHAK Sbjct: 206 VSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAK 265 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKYSE 39 LIKSG H+NSHVGSGL+DLYSKCG +L +KVF+EI PDLVLWNTMISGYS E S+ Sbjct: 266 LIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSD 325 Query: 38 DALDCFRRMQRV 3 +AL+CFR++Q V Sbjct: 326 EALECFRQLQGV 337 Score = 58.2 bits (139), Expect = 7e-07 Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 2/131 (1%) Frame = -2 Query: 398 VSWNSMIVAYGQHRE-GLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHA 222 V WN+MI Y + + +AL+ F+++ D +L CV++A + + G Q H Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG 367 Query: 221 KLIKSGCHENS-HVGSGLVDLYSKCGDGVLGAKKVFEEIREPDLVLWNTMISGYSQKEKY 45 +K N V + L+ +YSKCG+ + AK +F+ + E + V +N+MI+GY+Q Sbjct: 368 LALKLDIPSNRISVNNALIAMYSKCGN-LRDAKTLFDTMPEHNTVSYNSMIAGYAQ-HGM 425 Query: 44 SEDALDCFRRM 12 +L F+RM Sbjct: 426 GFQSLHLFQRM 436 Score = 57.0 bits (136), Expect = 2e-06 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%) Frame = -2 Query: 398 VSWNSMIVAYGQHREGLKALQVFQEMILRDFNVDMFTLACVLTAFTCVEDFRGGLQFHAK 219 VS+N++I AY + + A Q+F EM ++D FTL+ ++TA C + Q HA Sbjct: 106 VSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITA--CGINVGLIRQLHAL 163 Query: 218 LIKSGCHENSHVGSGLVDLYSKCGDGVLGAKKVFEEIREP-DLVLWNTMISGYSQKEKYS 42 + +G VG+ L+ YSK G + A+++F + E D V WN+M+ Y Q + S Sbjct: 164 SVVTGLDSYVSVGNALITSYSKNG-FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGS 222 Query: 41 EDALDCFRRM 12 + AL+ + M Sbjct: 223 K-ALELYLEM 231