BLASTX nr result
ID: Coptis25_contig00041867
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00041867
(337 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat... 159 2e-37
emb|CBI36755.3| unnamed protein product [Vitis vinifera] 145 3e-33
gb|AAO45757.1| selenium binding protein-like protein [Cucumis me... 134 8e-30
ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat... 132 3e-29
ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 127 9e-28
>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 159 bits (402), Expect = 2e-37
Identities = 73/112 (65%), Positives = 89/112 (79%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMIGAYNQYG+AN+ L LF DM+ AGF PD+AT L + G+CAHLGAL GQ LHA V
Sbjct: 282 WNSMIGAYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVS 341
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAMH 336
KTN +D A+GT+++DMYAK+GD E A Q+F+ L +KDVTAWTS+I G AMH
Sbjct: 342 KTNLTDDTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMH 393
Score = 86.7 bits (213), Expect = 2e-15
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI Y+ ++ L ++ +M+ G++PD T + +C+ + LGQ +H C+
Sbjct: 73 WNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIV 132
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITG 324
KT F DV T+++ MYA GD E+A ++F+ + + +V AWTS+I G
Sbjct: 133 KTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAG 180
Score = 60.1 bits (144), Expect = 2e-07
Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQ------- 159
W S+I ++ ++++ DM+ +P+E T++++ +CA L G+
Sbjct: 174 WTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTG 233
Query: 160 --GLHACVEKTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGF 327
GL +NF +V + T+I+DMYAK G ++A +FN + +++ AW SMI +
Sbjct: 234 QMGLDPFQSNSNF--NVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAY 289
>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 145 bits (366), Expect = 3e-33
Identities = 67/106 (63%), Positives = 83/106 (78%)
Frame = +1
Query: 19 AYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVEKTNFAE 198
AYNQYG+AN+ L LF DM+ AGF PD+AT L + G+CAHLGAL GQ LHA V KTN +
Sbjct: 262 AYNQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTD 321
Query: 199 DVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAMH 336
D A+GT+++DMYAK+GD E A Q+F+ L +KDVTAWTS+I G AMH
Sbjct: 322 DTAIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMH 367
Score = 86.7 bits (213), Expect = 2e-15
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI Y+ ++ L ++ +M+ G++PD T + +C+ + LGQ +H C+
Sbjct: 73 WNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCIV 132
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITG 324
KT F DV T+++ MYA GD E+A ++F+ + + +V AWTS+I G
Sbjct: 133 KTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAG 180
>gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo subsp. melo]
Length = 565
Score = 134 bits (337), Expect = 8e-30
Identities = 63/111 (56%), Positives = 84/111 (75%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI A++QYGR + L+LFVDM+ AGF P++AT LS+ +C HL GQ LHA V
Sbjct: 282 WNSMISAFSQYGRGAEALRLFVDMELAGFVPNKATFLSVIRACTHLRFRSTGQSLHARVL 341
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAM 333
K NF E VA+GT++MDMYAK+GD ++A +IF+ L +KDV AWT+MI+G A+
Sbjct: 342 KANFHEFVAIGTALMDMYAKSGDADTALKIFSKLRKKDVMAWTTMISGLAI 392
Score = 76.6 bits (187), Expect = 2e-12
Identities = 39/109 (35%), Positives = 57/109 (52%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI Y G L ++ +MQ GF PD T + C+ + L GQ +H +
Sbjct: 73 WNSMIKGYCNGGDKFGALFMYEEMQRKGFYPDHFTFPFVLKVCSAIDLLVYGQSVHNRIV 132
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGF 327
KT F DV + +++MY GD S ++F + + +V AWTS+I GF
Sbjct: 133 KTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGF 181
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
W S+I + + + L+LF DM+ G P+E T+ + + A + G+ + +
Sbjct: 174 WTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVRYRLR 233
Query: 181 K-------TNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAMH 336
+ TN +V + T+IMDMYAK G +A +F+ + ++++ W SMI+ F+ +
Sbjct: 234 QLGLDPFHTNSRFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAFSQY 292
>ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 132 bits (332), Expect = 3e-29
Identities = 60/111 (54%), Positives = 83/111 (74%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI AY+QYGR + L+LFVDM+ AGF P++AT LS+ +C H+G G+ LHA
Sbjct: 282 WNSMISAYSQYGRGAEALRLFVDMEMAGFVPNKATFLSVISACTHMGFRSTGRSLHARAL 341
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAM 333
+ +F E VA+GT++MDMYAK GD ++A +IF+ L +KDV AWT+MI+G A+
Sbjct: 342 RASFHEFVAIGTALMDMYAKAGDADTALKIFSKLRKKDVMAWTTMISGLAI 392
Score = 78.6 bits (192), Expect = 5e-13
Identities = 40/109 (36%), Positives = 58/109 (53%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI Y G L ++ +MQ GFSPD T + C+ + L GQ +H +
Sbjct: 73 WNSMIKGYCNGGDKFGALFMYEEMQRKGFSPDHFTFPFVLKVCSIIDLLVYGQSVHNRIV 132
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGF 327
KT F DV + +++MY GD S ++F + + +V AWTS+I GF
Sbjct: 133 KTGFELDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNVVAWTSLIAGF 181
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
W S+I + + + L+LF DM+ G P+E T+ + + A + G+ +H +
Sbjct: 174 WTSLIAGFVNNDQPKEALRLFKDMENEGVEPNEITMTTALAAAARCRDIHTGKLVHDRLR 233
Query: 181 K-------TNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAMH 336
+ TN +V + T+IMDMYAK G +A +F+ + ++++ W SMI+ ++ +
Sbjct: 234 QLGFDPFDTNSCFNVILATAIMDMYAKCGKLVTARNLFDKMPQRNLVVWNSMISAYSQY 292
>ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 127 bits (319), Expect = 9e-28
Identities = 61/112 (54%), Positives = 77/112 (68%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI AYNQY R + L LF DM +G PD+AT LS+ CAHL AL LGQ +HA +
Sbjct: 270 WNSMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLX 329
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGFAMH 336
KT D+++ T+++DMYAKTG SA +IF+ L ++DV WTSMI G AMH
Sbjct: 330 KTGIGTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMH 381
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
W +I Y + + LK+F DM G P+E T+++ CA GQ +H +
Sbjct: 162 WTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIR 221
Query: 181 KTNF-------AEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGF 327
K + ++ + T+I++MYAK G + A +FN + ++++ +W SMI +
Sbjct: 222 KAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAY 277
Score = 65.1 bits (157), Expect = 6e-09
Identities = 30/109 (27%), Positives = 53/109 (48%)
Frame = +1
Query: 1 WNSMIGAYNQYGRANDTLKLFVDMQFAGFSPDEATLLSLFGSCAHLGALRLGQGLHACVE 180
WNSMI + ++ L+ + G+SPD T + +C + G+ +H C+
Sbjct: 61 WNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIHCCIV 120
Query: 181 KTNFAEDVAVGTSIMDMYAKTGDTESAFQIFNGLSRKDVTAWTSMITGF 327
K+ F D T ++ MY D +S ++F+ + +V AWT +I G+
Sbjct: 121 KSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGY 169