BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041864
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]                  82   5e-14
ref|XP_003554482.1| PREDICTED: cullin-1-like [Glycine max]             80   2e-13
ref|XP_003521545.1| PREDICTED: cullin-1-like [Glycine max]             80   2e-13
ref|XP_003625883.1| Cullin-like protein1 [Medicago truncatula] g...    80   2e-13
emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]                  79   5e-13

>gb|AFJ21664.1| cullin 1-like protein A [Prunus avium]
          Length = 738

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
 Frame = +2

Query: 50  EKKIISFKEGWNLLEK---KIKVVMEGLPKTKCGSEEYIQIYGTKYTMCTQIPPNDYSQQ 220
           E+KII   +GW+ ++K   K+K ++EG+P+ +  SEEY+ +Y T Y MCTQ PPNDYSQQ
Sbjct: 2   ERKIIELDQGWDYMQKGITKLKKILEGIPEPQFNSEEYMMLYTTIYNMCTQKPPNDYSQQ 61

Query: 221 LYSQCYGLFIEHITS 265
           LY +    F E+ITS
Sbjct: 62  LYDKYREAFEEYITS 76


>ref|XP_003554482.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 736

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = +2

Query: 50  EKKIISFKEGWNLLEK---KIKVVMEGLPKTKCGSEEYIQIYGTKYTMCTQIPPNDYSQQ 220
           E+KII F +GW+ ++K   K+K ++EG P+T   SEEY+ +Y T Y MCTQ PPND+SQQ
Sbjct: 2   ERKIIDFDQGWDYMQKGITKLKRILEGAPETPFSSEEYMMLYTTIYNMCTQKPPNDFSQQ 61

Query: 221 LYSQCYGLFIEHITS 265
           LY +    F E+I +
Sbjct: 62  LYDKYKDAFDEYINT 76


>ref|XP_003521545.1| PREDICTED: cullin-1-like [Glycine max]
          Length = 728

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
 Frame = +2

Query: 50  EKKIISFKEGWNLLEK---KIKVVMEGLPKTKCGSEEYIQIYGTKYTMCTQIPPNDYSQQ 220
           E+KII F +GW+ ++K   K+K ++EG P+T   SEEY+ +Y T Y MCTQ PPND+SQQ
Sbjct: 2   ERKIIDFDQGWDYMQKGITKLKKILEGAPETPFSSEEYMMLYTTIYNMCTQKPPNDFSQQ 61

Query: 221 LYSQCYGLFIEHI 259
           LY +    F E+I
Sbjct: 62  LYDKYKDAFDEYI 74


>ref|XP_003625883.1| Cullin-like protein1 [Medicago truncatula]
           gi|355500898|gb|AES82101.1| Cullin-like protein1
           [Medicago truncatula]
          Length = 728

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
 Frame = +2

Query: 50  EKKIISFKEGWNLLE---KKIKVVMEGLPKTKCGSEEYIQIYGTKYTMCTQIPPNDYSQQ 220
           ++K+I F +GW  +E   KK+K ++EGLP+T+  SEEY+ +Y T Y MCTQ PP DYSQQ
Sbjct: 2   DRKVIDFDQGWAYMENGIKKLKRILEGLPETQFTSEEYMMLYTTIYNMCTQKPPLDYSQQ 61

Query: 221 LYSQCYGLFIEHITS 265
           LY +   +F E+I S
Sbjct: 62  LYDKYKEVFDEYIRS 76


>emb|CCH26221.1| CUL1 protein [Pyrus x bretschneideri]
          Length = 744

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = +2

Query: 35  MAINDEKKIISFKEGWNLLEK---KIKVVMEGLPKTKCGSEEYIQIYGTKYTMCTQIPPN 205
           MAI+ E+K I  ++GW  ++K   K+K ++EGLP+ +  SE+Y+ +Y T Y MCTQ PP+
Sbjct: 1   MAIH-ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFSSEDYMMLYTTIYNMCTQKPPH 59

Query: 206 DYSQQLYSQCYGLFIEHITS 265
           DYSQQLY +    F E+ITS
Sbjct: 60  DYSQQLYDKYRESFEEYITS 79