BLASTX nr result

ID: Coptis25_contig00041843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041843
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284588.1| PREDICTED: probable receptor-like protein ki...   114   6e-24
ref|XP_002520319.1| kinase, putative [Ricinus communis] gi|22354...   106   2e-21
ref|XP_002306651.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_003542144.1| PREDICTED: probable receptor-like protein ki...    93   2e-17
ref|XP_003543983.1| PREDICTED: probable receptor-like protein ki...    90   2e-16

>ref|XP_002284588.1| PREDICTED: probable receptor-like protein kinase At1g11050 [Vitis
           vinifera]
          Length = 612

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/141 (45%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
 Frame = -2

Query: 421 NELGPDDTRTASCILGLQLPGSAIGKMSKGVDSNHFKLIXXXXXXXXXXXXXXXXXXXVY 242
           NELGP D  TA+CILGL L  S  G+ S  +       +                   +Y
Sbjct: 190 NELGPQDGTTAACILGLPLSNSKTGETSNHLSQETLFKLIFGFLGAFLVVLFALGSVVLY 249

Query: 241 RFWNKRQKHKEGHVKFVSHAKATLKPHTGAIWFQIGEVKLATDGFSQRNLI--AGYGVVY 68
           R W K++K+   H +FVS  +A + P+TGA W+ I E++ ATDGFSQ+N I    YGVV+
Sbjct: 250 RIWQKKKKNAF-HEEFVSSMQARVLPNTGAKWYHIAEIERATDGFSQKNFIGQGAYGVVH 308

Query: 67  KGTLSDGTKVAVKKIMDLDSK 5
           KGTLSDGT VAVK+I+DLDS+
Sbjct: 309 KGTLSDGTLVAVKQILDLDSQ 329


>ref|XP_002520319.1| kinase, putative [Ricinus communis] gi|223540538|gb|EEF42105.1|
           kinase, putative [Ricinus communis]
          Length = 562

 Score =  106 bits (265), Expect = 2e-21
 Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
 Frame = -2

Query: 421 NELGPDDTRTASCILGLQLPGSAIGKMSKGVDSNHFKLIXXXXXXXXXXXXXXXXXXXVY 242
           NE GP +  TA CILGL L GSAI   SK    +    +                    Y
Sbjct: 198 NEFGPMNASTAGCILGLPLTGSAINNSSKSSKKDKLLKLVFGFIGAVLGALIAFGVIIWY 257

Query: 241 RFWNKRQKHKEGHVKFVSHAKATLKPHTGAIWFQIGEVKLATDGFSQRNLI--AGYGVVY 68
           R ++K++K    H ++VS  +A++ P++GA WF   E++ AT+GFSQ+N I    YGVVY
Sbjct: 258 RRYDKKRKLNASHEEYVSSFRASVLPNSGAKWFHFSELERATNGFSQKNFIGQGTYGVVY 317

Query: 67  KGTLSDGTKVAVKKIMDLDSK 5
           KGTL+DGT VAVK++ D DS+
Sbjct: 318 KGTLADGTIVAVKQMQDSDSQ 338


>ref|XP_002306651.1| predicted protein [Populus trichocarpa] gi|222856100|gb|EEE93647.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  104 bits (260), Expect = 7e-21
 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
 Frame = -2

Query: 421 NELGPDDTRTASCILGLQLPGSAIGKMSKGVDSNHFKLIXXXXXXXXXXXXXXXXXXXVY 242
           +ELGP D +TA+C L L L  S   K +K  D    KL+                    Y
Sbjct: 201 SELGPLDAKTAACTLALPLANSGTKKPAKSKDKL-LKLVFGLLGSLIGVLLAFGLITM-Y 258

Query: 241 RFWNKRQKHKEGHVKFVSHAKATLKPHTGAIWFQIGEVKLATDGFSQRNLI--AGYGVVY 68
           R W++++K    H +FVS  KA++ P++GA WF + E++ AT GFSQRN I    YG VY
Sbjct: 259 RKWDRKRKVSASHERFVSSFKASMLPNSGAKWFHLSELERATQGFSQRNFIGQGAYGFVY 318

Query: 67  KGTLSDGTKVAVKKIMDLDSK 5
           KGTL+DGT VAVK++ DLDS+
Sbjct: 319 KGTLADGTLVAVKQMHDLDSQ 339


>ref|XP_003542144.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 613

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
 Frame = -2

Query: 421 NELGPDDTRTASCILGLQLPGSAIGKMSKGVDSNHFKLIXXXXXXXXXXXXXXXXXXXVY 242
           N+ GP +  TASCILG+ L  S  G  ++G+     KL+                    Y
Sbjct: 190 NQFGPTNLGTASCILGMPL--SVKGSSNRGLV---LKLVIGLLGAFVGVLLAFVLIVV-Y 243

Query: 241 RFWNKRQKHKEGHVKFVSHAKATLKPHTGAIWFQIGEVKLATDGFSQRNLI--AGYGVVY 68
           R W+KR+K    H +  S  + ++ P+TGA WF I E++ AT  FSQRN++   G GVVY
Sbjct: 244 RKWDKRRKEDMHHREIESGVRNSVLPNTGAKWFHISELERATSKFSQRNMLGQGGDGVVY 303

Query: 67  KGTLSDGTKVAVKKIMDLDSK 5
           KGTLSDGT VAVK+I  L++K
Sbjct: 304 KGTLSDGTVVAVKEIFGLETK 324


>ref|XP_003543983.1| PREDICTED: probable receptor-like protein kinase At1g11050-like
           [Glycine max]
          Length = 603

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 53/141 (37%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
 Frame = -2

Query: 421 NELGPDDTRTASCILGLQLPGSAIGKMSKGVDSNHFKLIXXXXXXXXXXXXXXXXXXXVY 242
           N+ G  D  T SCILGL+ P S + +          KL                    +Y
Sbjct: 195 NQFGTTDVSTTSCILGLRQPSSGVIEEGSSNTEEVLKL-GFSLLGVIIGVVLALLTIVMY 253

Query: 241 RFWNKRQKHKEGHVKFVSHAKATLKPHTGAIWFQIGEVKLATDGFSQRNLI--AGYGVVY 68
           + W+KR+K    H +  +  +A + P+ GA WF + E+K AT+ FS RN++   G GVVY
Sbjct: 254 KKWDKRRKEHVYHREIENKVRAGVLPNAGAKWFDVSELKCATNKFSPRNVVGQGGDGVVY 313

Query: 67  KGTLSDGTKVAVKKIMDLDSK 5
           KG LSDG  VAVK+I DL++K
Sbjct: 314 KGILSDGAVVAVKEIFDLEAK 334


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