BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041835
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI69753.1| MADS3 protein, partial [Selaginella pallescens]        60   2e-07
emb|CAX46410.1| MADS3 protein [Selaginella moellendorffii]             60   2e-07
emb|CAX46409.1| MADS3 protein [Selaginella moellendorffii]             60   2e-07
ref|XP_002963695.1| MADS-domain transcription factor [Selaginell...    60   2e-07
ref|XP_002974785.1| MADS-domain transcription factor [Selaginell...    60   2e-07

>emb|CBI69753.1| MADS3 protein, partial [Selaginella pallescens]
          Length = 435

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 35  KVKVARKRMNRRFARLKRYSKLRKEFIKDAAEVSALYGTDVGLIMFFPTGSLTRFATIGR 214
           +VK+  K++    AR   YSK R   +K A E+S L  TDV LIMF P G L+     GR
Sbjct: 3   RVKLEIKKIENHQARQVTYSKRRNGLMKKAFELSTLCDTDVALIMFSPAGKLSIHPNDGR 62

Query: 215 IDKDILRQFGIPEEDR--RQWESEQ 283
           I++ ILR   +PE +R  R+ +SE+
Sbjct: 63  IEEIILRFISLPENERTKRRLDSEE 87


>emb|CAX46410.1| MADS3 protein [Selaginella moellendorffii]
          Length = 447

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 35  KVKVARKRMNRRFARLKRYSKLRKEFIKDAAEVSALYGTDVGLIMFFPTGSLTRFATIGR 214
           +VK+  K++    AR   YSK R   +K A E+S L  TDV LIMF P G L+     GR
Sbjct: 3   RVKLEIKKIENHQARQVTYSKRRNGLMKKAFELSTLCDTDVALIMFSPAGKLSIHPNDGR 62

Query: 215 IDKDILRQFGIPEEDR--RQWESEQ 283
           I++ ILR   +PE +R  R+ +SE+
Sbjct: 63  IEEIILRFISLPENERTKRRLDSEE 87


>emb|CAX46409.1| MADS3 protein [Selaginella moellendorffii]
          Length = 447

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 35  KVKVARKRMNRRFARLKRYSKLRKEFIKDAAEVSALYGTDVGLIMFFPTGSLTRFATIGR 214
           +VK+  K++    AR   YSK R   +K A E+S L  TDV LIMF P G L+     GR
Sbjct: 3   RVKLEIKKIENHQARQVTYSKRRNGLMKKAFELSTLCDTDVALIMFSPAGKLSIHPNDGR 62

Query: 215 IDKDILRQFGIPEEDR--RQWESEQ 283
           I++ ILR   +PE +R  R+ +SE+
Sbjct: 63  IEEIILRFISLPENERTKRRLDSEE 87


>ref|XP_002963695.1| MADS-domain transcription factor [Selaginella moellendorffii]
           gi|300168963|gb|EFJ35566.1| MADS-domain transcription
           factor [Selaginella moellendorffii]
          Length = 351

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 35  KVKVARKRMNRRFARLKRYSKLRKEFIKDAAEVSALYGTDVGLIMFFPTGSLTRFATIGR 214
           +VK+  K++    AR   YSK R   +K A E+S L  TDV LIMF P G L+     GR
Sbjct: 3   RVKLEIKKIENHQARQVTYSKRRNGLMKKAFELSTLCDTDVALIMFSPAGKLSIHPNDGR 62

Query: 215 IDKDILRQFGIPEEDR--RQWESEQ 283
           I++ ILR   +PE +R  R+ +SE+
Sbjct: 63  IEEIILRFISLPENERTKRRLDSEE 87


>ref|XP_002974785.1| MADS-domain transcription factor [Selaginella moellendorffii]
           gi|300157680|gb|EFJ24305.1| MADS-domain transcription
           factor [Selaginella moellendorffii]
          Length = 448

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
 Frame = +2

Query: 35  KVKVARKRMNRRFARLKRYSKLRKEFIKDAAEVSALYGTDVGLIMFFPTGSLTRFATIGR 214
           +VK+  K++    AR   YSK R   +K A E+S L  TDV LIMF P G L+     GR
Sbjct: 3   RVKLEIKKIENHQARQVTYSKRRNGLMKKAFELSTLCDTDVALIMFSPAGKLSIHPNDGR 62

Query: 215 IDKDILRQFGIPEEDR--RQWESEQ 283
           I++ ILR   +PE +R  R+ +SE+
Sbjct: 63  IEEIILRFISLPENERTKRRLDSEE 87