BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041829
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]      96   3e-18
ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp....    94   1e-17
ref|XP_002534159.1| conserved hypothetical protein [Ricinus comm...    93   2e-17
ref|XP_003635249.1| PREDICTED: uncharacterized protein LOC100251...    90   2e-16
emb|CBI23468.3| unnamed protein product [Vitis vinifera]               90   2e-16

>gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]
          Length = 1161

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/111 (47%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
 Frame = +3

Query: 42  YSMDSSTHKKSTELAXXXXXXXXXXXXXXXXNEIESFLHKHTTDQKKSFFSIAFPSLICK 221
           Y++DS +  +S +LA                + +ESFLH HT DQ + FFSI FPSLICK
Sbjct: 6   YTVDSLS--QSQDLASNILAASTPSAISAACSSVESFLHSHTPDQYRHFFSITFPSLICK 63

Query: 222 LFGFDEFSS-----SKSNNNSWIDLIQCSNDSELEIRVFNLLSPSGILFSS 359
           +FGF + ++     S S  N WID+I  +NDS+L  RVF+LLSPSGIL SS
Sbjct: 64  IFGFGDATAPSPAQSSSPQNGWIDVITATNDSDLSGRVFSLLSPSGILMSS 114


>ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310956|gb|EFH41380.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1054

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
 Frame = +3

Query: 42  YSMDSSTHKKSTELAXXXXXXXXXXXXXXXXNEIESFLHKHTTDQKKSFFSIAFPSLICK 221
           Y++DS +  +S +LA                + +ESFLH HT DQ + FFS+ FPSLICK
Sbjct: 6   YTVDSLS--QSQDLASAILSASTPSNISAACSSVESFLHSHTPDQCRHFFSVTFPSLICK 63

Query: 222 LFGFDEFS------SSKSNNNSWIDLIQCSNDSELEIRVFNLLSPSGILFSS 359
           +FGF + +      SS    N WID+I  +ND +L  RVFNLLSPSGIL SS
Sbjct: 64  IFGFGDATAASPAPSSSLRPNGWIDVISAANDLDLAERVFNLLSPSGILMSS 115


>ref|XP_002534159.1| conserved hypothetical protein [Ricinus communis]
           gi|223525770|gb|EEF28225.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 785

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
 Frame = +3

Query: 39  LYSMDSSTHKKSTELAXXXXXXXXXXXXXXXXNEIESFLHKHTTDQKKSFFSIAFPSLIC 218
           L+S    +  KS +LA                  I+SFLH H  DQ + FFS+AFP+LIC
Sbjct: 3   LHSSTLDSLSKSQDLASSILSSSTPSQISSVCASIDSFLHLHLPDQSRHFFSLAFPTLIC 62

Query: 219 KLFGFDEFSSS----KSNNNSWIDLIQCSNDSELEIRVFNLLSPSGILFSS 359
           KL+GF + SS+     S++N WID+I  SNDS+L  +VFNLLSP+G++F S
Sbjct: 63  KLYGFCDASSNGPHLTSSSNGWIDIILQSNDSDLASKVFNLLSPNGVVFQS 113


>ref|XP_003635249.1| PREDICTED: uncharacterized protein LOC100251036 [Vitis vinifera]
          Length = 531

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = +3

Query: 42  YSMDSSTHKKSTELAXXXXXXXXXXXXXXXXNEIESFLHKHTTDQKKSFFSIAFPSLICK 221
           +S  +    KS  LA                  ++SFLH H  DQ + FFSIAFP+LICK
Sbjct: 4   HSYTTDPQSKSQSLASTILAASSPPQISAACAAVDSFLHHHNPDQSRHFFSIAFPTLICK 63

Query: 222 LFGFDEFSSSKSNN-NSWIDLIQCSNDSELEIRVFNLLSPSGILFSS 359
           LFGFD+ S    N+ N WID +  SND +   RVFNLLSP  +L  S
Sbjct: 64  LFGFDDSSPQNPNSPNGWIDAVFASNDRDFASRVFNLLSPDSVLMQS 110


>emb|CBI23468.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
 Frame = +3

Query: 42  YSMDSSTHKKSTELAXXXXXXXXXXXXXXXXNEIESFLHKHTTDQKKSFFSIAFPSLICK 221
           +S  +    KS  LA                  ++SFLH H  DQ + FFSIAFP+LICK
Sbjct: 4   HSYTTDPQSKSQSLASTILAASSPPQISAACAAVDSFLHHHNPDQSRHFFSIAFPTLICK 63

Query: 222 LFGFDEFSSSKSNN-NSWIDLIQCSNDSELEIRVFNLLSPSGILFSS 359
           LFGFD+ S    N+ N WID +  SND +   RVFNLLSP  +L  S
Sbjct: 64  LFGFDDSSPQNPNSPNGWIDAVFASNDRDFASRVFNLLSPDSVLMQS 110