BLASTX nr result
ID: Coptis25_contig00041824
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041824 (779 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi... 294 2e-77 ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi... 273 4e-71 ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi... 270 2e-70 ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containi... 270 3e-70 ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2... 241 2e-61 >ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Vitis vinifera] Length = 492 Score = 294 bits (752), Expect = 2e-77 Identities = 154/282 (54%), Positives = 197/282 (69%), Gaps = 25/282 (8%) Frame = -3 Query: 771 VSILKEQRSKSRWNYIKTLVNPNGFTSKQVSEITLGIKNNPRLALRFFHWSQKNSLCKHD 592 VSIL+ QRSKSRW+++++L P GFT + S+I L IKNNP LAL FF W SLC H Sbjct: 41 VSILRHQRSKSRWSHLQSLF-PKGFTPTEASQIVLQIKNNPHLALSFFLWCHHKSLCNHT 99 Query: 591 LVSYSTIIHILARARLKTSSQTLMRTVIRVYD--------PLEVFETLVKSYRYCDSAPF 436 L+SYSTIIHILARARLK+ + L+RT IRV+D P ++FE+LVK+Y C SAPF Sbjct: 100 LLSYSTIIHILARARLKSQALGLIRTAIRVFDDSDECSSQPPKIFESLVKTYNSCGSAPF 159 Query: 435 VFDLLVKVCLLGNKIDCAIEIVRMLRSRGICMNITTCNMLIRCVFKLRGCDACLVVYRQV 256 VFDLL+K CL +I+ +I IV+MLRSRGI I+TCN LI V + RGCDA +YR+V Sbjct: 160 VFDLLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEIYREV 219 Query: 255 F-----------------RDRIMPNVQTMNTLLLCFYQDGIMERVEEIWDEMCKHSMCCC 127 F R R+ PNV T N L++CFY+DG +E+VEEIW EM + C Sbjct: 220 FGSWDDEINEKVRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWD--CN 277 Query: 126 PNVYSYSVLLAAFCDQGKMGEAMRLWDEMRVKEVKPDVMAYN 1 PN YSYSVL+AAFCD+G+MGE +LW+EMR+K+++ D+MAYN Sbjct: 278 PNAYSYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYN 319 >ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Glycine max] Length = 487 Score = 273 bits (697), Expect = 4e-71 Identities = 147/286 (51%), Positives = 190/286 (66%), Gaps = 27/286 (9%) Frame = -3 Query: 777 EVVSILKEQRSKSRWNYIKTLVNPNGFTSKQVSEITLGIKNNPRLALRFFHWSQKNSLCK 598 + VSIL RSKSRW+ +++ PNG T + SEITL IKN P+LALRFF W++ SLC Sbjct: 37 DAVSILTHHRSKSRWSNLRSAC-PNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCN 95 Query: 597 HDLVSYSTIIHILARARLKTSSQTLMRTVIRVYD------------PLEVFETLVKSYRY 454 H+L SYS+IIH+LARARL + + L+RT IR PL +FETLVK+YR Sbjct: 96 HNLASYSSIIHLLARARLSSHAYDLIRTAIRASHQNDEENCRFNSRPLNLFETLVKTYRD 155 Query: 453 CDSAPFVFDLLVKVCLLGNKIDCAIEIVRMLRSRGICMNITTCNMLIRCVFKLRGCDACL 274 SAPFVFDLL+K CL K+D +IEIVRML SRGI ++T N LI V K RG D Sbjct: 156 SGSAPFVFDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGY 215 Query: 273 VVYRQVFR--------------DRIMPNVQTMNTLLLCFYQDGIMERVEEIWDEM-CKHS 139 +YR+ FR R+ PNV T N L+LC YQDG++ERVE+IW EM C + Sbjct: 216 AIYREFFRLDEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEMKCNYK 275 Query: 138 MCCCPNVYSYSVLLAAFCDQGKMGEAMRLWDEMRVKEVKPDVMAYN 1 PN YSYSVL+A FCD+G+MG+A +LW+E+R ++++PDV++YN Sbjct: 276 ----PNAYSYSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYN 317 >ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Cucumis sativus] Length = 499 Score = 270 bits (691), Expect = 2e-70 Identities = 139/288 (48%), Positives = 190/288 (65%), Gaps = 30/288 (10%) Frame = -3 Query: 774 VVSILKEQRSKSRWNYIKTLVNPNGFTSKQVSEITLGIKNNPRLALRFFHWSQKNSLCKH 595 VVS+L QRSKSRW ++ +L PNGF + S+I L IKNNP LALRFF W+Q SLC H Sbjct: 46 VVSVLTHQRSKSRWRFLNSLC-PNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNH 104 Query: 594 DLVSYSTIIHILARARLKTSSQTLMRTVIRVYD-----------------PLEVFETLVK 466 +L+SYST+IHILAR RL+T ++ +++T IR PL++FETLVK Sbjct: 105 NLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVK 164 Query: 465 SYRYCDSAPFVFDLLVKVCLLGNKIDCAIEIVRMLRSRGICMNITTCNMLIRCVFKLRGC 286 +Y+ C SAPFVFDLL+K L K+D +IEIVRMLRSRGI ++T N LI V K +G Sbjct: 165 TYKRCGSAPFVFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGA 224 Query: 285 DACLVVYRQVF-------------RDRIMPNVQTMNTLLLCFYQDGIMERVEEIWDEMCK 145 + ++R+VF + R+ PNV T NTL+ CFY+DG + RV+EIWD++ Sbjct: 225 NVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFVGRVKEIWDQLAD 284 Query: 144 HSMCCCPNVYSYSVLLAAFCDQGKMGEAMRLWDEMRVKEVKPDVMAYN 1 + PN YSYS+L+ C++ + GEA LW+EM++K+++PDV+AYN Sbjct: 285 SN--STPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330 >ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Cucumis sativus] gi|449472579|ref|XP_004153637.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15980-like [Cucumis sativus] Length = 499 Score = 270 bits (689), Expect = 3e-70 Identities = 139/288 (48%), Positives = 189/288 (65%), Gaps = 30/288 (10%) Frame = -3 Query: 774 VVSILKEQRSKSRWNYIKTLVNPNGFTSKQVSEITLGIKNNPRLALRFFHWSQKNSLCKH 595 VVS+L QRSKSRW ++ +L PNGF + S+I L IKNNP LALRFF W+Q SLC H Sbjct: 46 VVSVLTHQRSKSRWRFLNSLC-PNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNH 104 Query: 594 DLVSYSTIIHILARARLKTSSQTLMRTVIRVYD-----------------PLEVFETLVK 466 +L+SYST+IHILAR RL+T ++ +++T IR PL++FETLVK Sbjct: 105 NLISYSTLIHILARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVK 164 Query: 465 SYRYCDSAPFVFDLLVKVCLLGNKIDCAIEIVRMLRSRGICMNITTCNMLIRCVFKLRGC 286 +Y+ C SAPFVFDLL+K L K+D +IEIVRMLRSRGI ++T N LI V K +G Sbjct: 165 TYKRCGSAPFVFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGA 224 Query: 285 DACLVVYRQVF-------------RDRIMPNVQTMNTLLLCFYQDGIMERVEEIWDEMCK 145 + ++R+VF + R+ PNV T NTL+ CFY+DG RV+EIWD++ Sbjct: 225 NVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLAD 284 Query: 144 HSMCCCPNVYSYSVLLAAFCDQGKMGEAMRLWDEMRVKEVKPDVMAYN 1 + PN YSYS+L+ C++ + GEA LW+EM++K+++PDV+AYN Sbjct: 285 SN--STPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330 >ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa] Length = 498 Score = 241 bits (614), Expect = 2e-61 Identities = 135/281 (48%), Positives = 183/281 (65%), Gaps = 23/281 (8%) Frame = -3 Query: 774 VVSILKEQRSKSRWNYIKTLVNPNGFTSK---QVSEITLGIKNNPRLALRFFHWSQKNS- 607 ++S+L RSKSRW+++++L+ T S ITL +K+NP LAL FFH++ NS Sbjct: 43 IISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLKLKSNPHLALSFFHFTLHNSS 102 Query: 606 LCKHDLVSYSTIIHILARARLKTSSQTLMRTVIR------VYDPLEVFETLVKSYRYCDS 445 LC H+L SY+TIIHIL+RARLK +Q ++R +R + + FE LVKSYR CDS Sbjct: 103 LCSHNLRSYATIIHILSRARLKAHAQEIIRAGLRSQILYHLLKEVRFFEVLVKSYRECDS 162 Query: 444 APFVFDLLVKVCLLGNKIDCAIEIVRMLRSRGICMNITTCNMLIRCVFKLRGCDACLVVY 265 APFVFDLL+K CL KID +IEIV+MLRS+GI +I+TCN LI V + +G V+ Sbjct: 163 APFVFDLLIKSCLELKKIDGSIEIVKMLRSKGISPSISTCNALISEVSRCKGSFVGYGVF 222 Query: 264 RQVF-------------RDRIMPNVQTMNTLLLCFYQDGIMERVEEIWDEMCKHSMCCCP 124 ++VF R+ PNV + N L++ FY++G +E VEEIW EM + C Sbjct: 223 KEVFGLESCELGEKMRRGFRVRPNVHSFNELMVGFYRNGEVEMVEEIWSEMERFG--CVA 280 Query: 123 NVYSYSVLLAAFCDQGKMGEAMRLWDEMRVKEVKPDVMAYN 1 N +SY VL+A FC+ G++ EA RLWDEMRVK + PDV+AYN Sbjct: 281 NGFSYGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYN 321