BLASTX nr result

ID: Coptis25_contig00041816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041816
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29896.3| unnamed protein product [Vitis vinifera]               75   6e-12
ref|XP_002282874.1| PREDICTED: protein cornichon homolog 1-like ...    75   6e-12
emb|CAN64231.1| hypothetical protein VITISV_035789 [Vitis vinifera]    75   6e-12
ref|XP_003519048.1| PREDICTED: protein cornichon homolog 1-like ...    72   5e-11
ref|NP_001236580.1| uncharacterized protein LOC100500341 precurs...    72   5e-11

>emb|CBI29896.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -3

Query: 222 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 43
           MSWEL+    +  + IA   L+ +  +QI  L DLE+DY+NPY+  + IN IV  +F++Q
Sbjct: 1   MSWELILWIIFFFINIA---LLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQ 57

Query: 42  GALCILFLLTQHWF 1
           G LCILFLLT HWF
Sbjct: 58  GVLCILFLLTWHWF 71


>ref|XP_002282874.1| PREDICTED: protein cornichon homolog 1-like [Vitis vinifera]
          Length = 146

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -3

Query: 222 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 43
           MSWEL+    +  + IA   L+ +  +QI  L DLE+DY+NPY+  + IN IV  +F++Q
Sbjct: 1   MSWELILWIIFFFINIA---LLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQ 57

Query: 42  GALCILFLLTQHWF 1
           G LCILFLLT HWF
Sbjct: 58  GVLCILFLLTWHWF 71


>emb|CAN64231.1| hypothetical protein VITISV_035789 [Vitis vinifera]
          Length = 160

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = -3

Query: 222 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 43
           MSWEL+    +  + IA   L+ +  +QI  L DLE+DY+NPY+  + IN IV  +F++Q
Sbjct: 1   MSWELILWIIFFFINIA---LLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQ 57

Query: 42  GALCILFLLTQHWF 1
           G LCILFLLT HWF
Sbjct: 58  GVLCILFLLTWHWF 71


>ref|XP_003519048.1| PREDICTED: protein cornichon homolog 1-like [Glycine max]
          Length = 149

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 222 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 43
           M W L  LF   I F A   L+ +  +Q+ +L DLESDYINP+D  + IN+ V  E++ Q
Sbjct: 1   MGWNL--LFWLVICFPANIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEYVGQ 58

Query: 42  GALCILFLLTQHWF 1
           GALC L L T HWF
Sbjct: 59  GALCALCLFTGHWF 72


>ref|NP_001236580.1| uncharacterized protein LOC100500341 precursor [Glycine max]
           gi|255630079|gb|ACU15393.1| unknown [Glycine max]
          Length = 149

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -3

Query: 222 MSWELVQLFGYTIVFIAVGTLIYANLHQIFLLEDLESDYINPYDLVACINFIVTKEFLVQ 43
           M W L  LF   I F +   L+ +  +Q+ +L DLESDYINP+D  + IN+ V  EF+ Q
Sbjct: 1   MGWNL--LFWLAICFPSNIALLASTFYQVLILSDLESDYINPFDAASRINYFVLPEFVGQ 58

Query: 42  GALCILFLLTQHWF 1
           GALC L L T HWF
Sbjct: 59  GALCALCLFTGHWF 72


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