BLASTX nr result
ID: Coptis25_contig00041814
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041814 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29860.3| unnamed protein product [Vitis vinifera] 168 4e-40 ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-36 ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi... 154 5e-36 ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi... 154 5e-36 ref|XP_002529617.1| pentatricopeptide repeat-containing protein,... 152 4e-35 >emb|CBI29860.3| unnamed protein product [Vitis vinifera] Length = 655 Score = 168 bits (426), Expect = 4e-40 Identities = 74/133 (55%), Positives = 108/133 (81%) Frame = +1 Query: 37 EQQQFLASLLKKCTNMKYLRQIHSHVLKSPLPPNLKTHLLCQIVGFCALSPSGDINHART 216 E+++ +A L++KC +M+ LRQIH+ +L +P + + LC+I+GFCALSP GDI++AR Sbjct: 55 EEEERIALLIRKCRSMRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARK 114 Query: 217 VFTQIQNPNIFSYNSMIRGCSQIQNPSKEPVFLYHKLIKTGYPNPNSYTLAFVLKACAVM 396 +F+QIQ PNIFS+NSMIRGCSQ Q PSKEPV L+ K+++ GYPNPN++T+AFVLKAC+++ Sbjct: 115 LFSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIV 174 Query: 397 LGFKEGWQIHSHV 435 +EG Q+H++V Sbjct: 175 SALEEGQQVHANV 187 >ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065 [Vitis vinifera] Length = 564 Score = 155 bits (392), Expect = 3e-36 Identities = 69/118 (58%), Positives = 96/118 (81%) Frame = +1 Query: 82 MKYLRQIHSHVLKSPLPPNLKTHLLCQIVGFCALSPSGDINHARTVFTQIQNPNIFSYNS 261 M+ LRQIH+ +L +P + + LC+I+GFCALSP GDI++AR +F+QIQ PNIFS+NS Sbjct: 1 MRVLRQIHARLLTHAMPISSISFGLCKIIGFCALSPYGDIDYARKLFSQIQRPNIFSWNS 60 Query: 262 MIRGCSQIQNPSKEPVFLYHKLIKTGYPNPNSYTLAFVLKACAVMLGFKEGWQIHSHV 435 MIRGCSQ Q PSKEPV L+ K+++ GYPNPN++T+AFVLKAC+++ +EG Q+H++V Sbjct: 61 MIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANV 118 >ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720, mitochondrial-like [Cucumis sativus] Length = 376 Score = 154 bits (390), Expect = 5e-36 Identities = 73/118 (61%), Positives = 93/118 (78%) Frame = +1 Query: 82 MKYLRQIHSHVLKSPLPPNLKTHLLCQIVGFCALSPSGDINHARTVFTQIQNPNIFSYNS 261 M+ LRQ+H+H+L PLP + L +IV FCALSP G+IN+AR+VF QI +PNIFS+NS Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60 Query: 262 MIRGCSQIQNPSKEPVFLYHKLIKTGYPNPNSYTLAFVLKACAVMLGFKEGWQIHSHV 435 +I+G SQI SKEP+FL+ KL +TGYP PNS+TLAFVLKACA++ F EG Q+HSHV Sbjct: 61 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHV 118 >ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus] Length = 564 Score = 154 bits (390), Expect = 5e-36 Identities = 73/118 (61%), Positives = 93/118 (78%) Frame = +1 Query: 82 MKYLRQIHSHVLKSPLPPNLKTHLLCQIVGFCALSPSGDINHARTVFTQIQNPNIFSYNS 261 M+ LRQ+H+H+L PLP + L +IV FCALSP G+IN+AR+VF QI +PNIFS+NS Sbjct: 1 MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60 Query: 262 MIRGCSQIQNPSKEPVFLYHKLIKTGYPNPNSYTLAFVLKACAVMLGFKEGWQIHSHV 435 +I+G SQI SKEP+FL+ KL +TGYP PNS+TLAFVLKACA++ F EG Q+HSHV Sbjct: 61 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHV 118 >ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223530902|gb|EEF32762.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 438 Score = 152 bits (383), Expect = 4e-35 Identities = 69/135 (51%), Positives = 100/135 (74%) Frame = +1 Query: 31 EGEQQQFLASLLKKCTNMKYLRQIHSHVLKSPLPPNLKTHLLCQIVGFCALSPSGDINHA 210 E E+++ +ASL++KC N+ +LRQIH+ +L LP + LL +I+ F ALSP GD+N+A Sbjct: 124 ELEEEKQIASLIQKCPNLHFLRQIHARILTRLLPIPTISFLLSKILSFSALSPLGDLNYA 183 Query: 211 RTVFTQIQNPNIFSYNSMIRGCSQIQNPSKEPVFLYHKLIKTGYPNPNSYTLAFVLKACA 390 R +F QI NP IF YN++IRGCS +NPS+EP FLY ++ G+P N++T+AFVLKACA Sbjct: 184 RKIFAQIPNPGIFPYNTIIRGCSYAKNPSREPYFLYKSMVTRGFPRANTFTMAFVLKACA 243 Query: 391 VMLGFKEGWQIHSHV 435 ++ F+EG QIH+ + Sbjct: 244 SIMAFEEGRQIHARI 258