BLASTX nr result
ID: Coptis25_contig00041778
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041778 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C... 115 3e-24 ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm... 109 2e-22 ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C... 100 1e-19 ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C... 100 1e-19 ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C... 92 6e-17 >ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed protein product [Vitis vinifera] Length = 557 Score = 115 bits (289), Expect = 3e-24 Identities = 61/94 (64%), Positives = 71/94 (75%), Gaps = 3/94 (3%) Frame = +3 Query: 27 NKKNVPKKIILSEGAPKLPEDVGNNDDVQPKLISSDGGGVLRF---VKRVPRRALSILSN 197 + K++ KKI+LSEGAP + ED N + QPK S GGG F VKR PR+ LS LSN Sbjct: 59 SSKSLAKKIVLSEGAPAVSEDGAGNGEAQPKPASKGGGGGGGFGGLVKRFPRKVLSRLSN 118 Query: 198 LPLAIGEMFTIAALMALGTAIDQGEAPGYYFQQY 299 LPLAIGEMFT+AALMALGTAIDQGEAP YYFQ++ Sbjct: 119 LPLAIGEMFTVAALMALGTAIDQGEAPDYYFQKF 152 >ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis] gi|223541761|gb|EEF43309.1| conserved hypothetical protein [Ricinus communis] Length = 556 Score = 109 bits (273), Expect = 2e-22 Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Frame = +3 Query: 15 ELKMNKKNVPKKIILSEGAPKLPED--VGNNDDVQPKLISSDGGGVLRFVKRVPRRALSI 188 E++ KNV +KI+LS AP + E+ GNN ++ P + GGG LRF KR+PR+ LS+ Sbjct: 55 EVENKDKNVSRKILLSNSAPPVSEEGGAGNNGEI-PDKAAKGGGGPLRFFKRLPRKVLSV 113 Query: 189 LSNLPLAIGEMFTIAALMALGTAIDQGEAPGYYFQQY 299 LSNLPLAIGEMF IA LMALGT IDQG+AP YFQ Y Sbjct: 114 LSNLPLAIGEMFAIAGLMALGTVIDQGQAPEIYFQNY 150 >ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Cucumis sativus] Length = 560 Score = 100 bits (249), Expect = 1e-19 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%) Frame = +3 Query: 33 KNVPKKIILSEGAPKLPEDVGNND-DVQPKLISSDGGGVLRFVKRVPRRALSILSNLPLA 209 KN KI+LSE AP L E+ + + + ++ +G ++ VKR+P+R L LSNLPLA Sbjct: 67 KNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLA 126 Query: 210 IGEMFTIAALMALGTAIDQGEAPGYYFQQY 299 IGEMFTIAALMALGT IDQGEAP +YFQ+Y Sbjct: 127 IGEMFTIAALMALGTVIDQGEAPDFYFQKY 156 >ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Cucumis sativus] Length = 557 Score = 100 bits (249), Expect = 1e-19 Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 1/90 (1%) Frame = +3 Query: 33 KNVPKKIILSEGAPKLPEDVGNND-DVQPKLISSDGGGVLRFVKRVPRRALSILSNLPLA 209 KN KI+LSE AP L E+ + + + ++ +G ++ VKR+P+R L LSNLPLA Sbjct: 57 KNASNKIVLSEAAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLA 116 Query: 210 IGEMFTIAALMALGTAIDQGEAPGYYFQQY 299 IGEMFTIAALMALGT IDQGEAP +YFQ+Y Sbjct: 117 IGEMFTIAALMALGTVIDQGEAPDFYFQKY 146 >ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like [Glycine max] Length = 563 Score = 91.7 bits (226), Expect = 6e-17 Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%) Frame = +3 Query: 15 ELKMNKKNVPKKIILSEGAPK-LPEDVGNNDDVQPKLISSDG-GGVLRFVKRVPRRALSI 188 E+K K+V +KI+LSE +P L ED NN D + SS GG+ + R+ L I Sbjct: 62 EMKNKGKSVSQKIVLSEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVANMLRRKTLQI 121 Query: 189 LSNLPLAIGEMFTIAALMALGTAIDQGEAPGYYFQQY 299 LSNLPLAIGEMF +A+LMALGT IDQGEAP +YFQ+Y Sbjct: 122 LSNLPLAIGEMFAVASLMALGTFIDQGEAPDFYFQKY 158