BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041747
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   321   6e-86
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              320   8e-86
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   320   8e-86
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   317   1e-84
gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein fr...   307   9e-82

>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  321 bits (822), Expect = 6e-86
 Identities = 156/198 (78%), Positives = 175/198 (88%), Gaps = 7/198 (3%)
 Frame = +3

Query: 3   RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161
           RPWQSYHTV+T AKA       EKVQ++VYEMSKGSK+F+NEERKEAFIKQKI+N+  QC
Sbjct: 11  RPWQSYHTVYTTAKAGMELVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDNLRIQC 70

Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341
           ANLT  D++ YQKVAD+RI+ELE +RDLS+ WLHVDMDAFYAAVETL NP L GKPMAVG
Sbjct: 71  ANLTQEDLAHYQKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVG 130

Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521
            MSM+STANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVF +YDPN
Sbjct: 131 SMSMLSTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFGRYDPN 190

Query: 522 FIASSLDEAYLDISEVCK 575
           FIA SLDEAYLDI+EVC+
Sbjct: 191 FIAGSLDEAYLDITEVCR 208


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  320 bits (821), Expect = 8e-86
 Identities = 160/197 (81%), Positives = 176/197 (89%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3   RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161
           RPWQSY TV+TNAKA       EKVQ+ VYEMSKGSK+FENEERKEAFI+QKI+NM A+C
Sbjct: 16  RPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARC 75

Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341
           A L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NP L G+PMAVG
Sbjct: 76  AKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVG 135

Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521
            MSMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPN
Sbjct: 136 GMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPN 195

Query: 522 FIASSLDEAYLDISEVC 572
           F+A+SLDEAYLDI+EVC
Sbjct: 196 FMAASLDEAYLDITEVC 212


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  320 bits (821), Expect = 8e-86
 Identities = 160/197 (81%), Positives = 176/197 (89%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3   RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161
           RPWQSY TV+TNAKA       EKVQ+ VYEMSKGSK+FENEERKEAFI+QKI+NM A+C
Sbjct: 16  RPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARC 75

Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341
           A L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NP L G+PMAVG
Sbjct: 76  AKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVG 135

Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521
            MSMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPN
Sbjct: 136 GMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPN 195

Query: 522 FIASSLDEAYLDISEVC 572
           F+A+SLDEAYLDI+EVC
Sbjct: 196 FMAASLDEAYLDITEVC 212


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
           gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
           polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  317 bits (811), Expect = 1e-84
 Identities = 155/198 (78%), Positives = 176/198 (88%), Gaps = 7/198 (3%)
 Frame = +3

Query: 3   RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161
           RPWQSYHTV+TNAKA       E+VQ+IVYEMSKGSK+FENEERKEA I++KIENM A+C
Sbjct: 12  RPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEATIREKIENMRARC 71

Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341
           A LTA D+S+YQKVADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NPLL GKPMAVG
Sbjct: 72  AQLTATDLSQYQKVADKRILELESTRDLSRIWLHVDMDAFYAAVETLSNPLLKGKPMAVG 131

Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521
            MSM+STANYEARK+GVRAAMPGFIAR+LCPELI VP +F KY + S+LTRKVF +YDPN
Sbjct: 132 SMSMLSTANYEARKYGVRAAMPGFIARRLCPELILVPTNFDKYNYYSDLTRKVFHRYDPN 191

Query: 522 FIASSLDEAYLDISEVCK 575
           F+A+SLDEAYLDI+EVCK
Sbjct: 192 FLAASLDEAYLDITEVCK 209


>gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein from Homo sapiens gb|AF194973
           and contains an IMS PF|00817 domain [Arabidopsis
           thaliana]
          Length = 435

 Score =  307 bits (786), Expect = 9e-82
 Identities = 150/198 (75%), Positives = 173/198 (87%), Gaps = 7/198 (3%)
 Frame = +3

Query: 3   RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161
           RPW+SY+TVFTNAKA       EKVQ++VYEMSKGSK+F+NEERKEA +KQKIE+M  +C
Sbjct: 14  RPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMKQKIEHMRDRC 73

Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341
           A L++ D+S YQKV DKRI+ELE TRDLS+ WLHVDMDAFYAAVETL +P + GKPMAVG
Sbjct: 74  AKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPSIKGKPMAVG 133

Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521
            +SMISTANYEARKFGVRAAMPGFIARKLCP+LIFVP DF KYTH S+LTRKVF+ YDP+
Sbjct: 134 GLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPH 193

Query: 522 FIASSLDEAYLDISEVCK 575
           FIA SLDEAYLDI+EVC+
Sbjct: 194 FIAGSLDEAYLDITEVCR 211