BLASTX nr result
ID: Coptis25_contig00041747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00041747 (580 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin... 321 6e-86 emb|CBI22452.3| unnamed protein product [Vitis vinifera] 320 8e-86 ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ... 320 8e-86 ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi... 317 1e-84 gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein fr... 307 9e-82 >ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max] Length = 663 Score = 321 bits (822), Expect = 6e-86 Identities = 156/198 (78%), Positives = 175/198 (88%), Gaps = 7/198 (3%) Frame = +3 Query: 3 RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161 RPWQSYHTV+T AKA EKVQ++VYEMSKGSK+F+NEERKEAFIKQKI+N+ QC Sbjct: 11 RPWQSYHTVYTTAKAGMELVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDNLRIQC 70 Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341 ANLT D++ YQKVAD+RI+ELE +RDLS+ WLHVDMDAFYAAVETL NP L GKPMAVG Sbjct: 71 ANLTQEDLAHYQKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVG 130 Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521 MSM+STANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVF +YDPN Sbjct: 131 SMSMLSTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFGRYDPN 190 Query: 522 FIASSLDEAYLDISEVCK 575 FIA SLDEAYLDI+EVC+ Sbjct: 191 FIAGSLDEAYLDITEVCR 208 >emb|CBI22452.3| unnamed protein product [Vitis vinifera] Length = 704 Score = 320 bits (821), Expect = 8e-86 Identities = 160/197 (81%), Positives = 176/197 (89%), Gaps = 7/197 (3%) Frame = +3 Query: 3 RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161 RPWQSY TV+TNAKA EKVQ+ VYEMSKGSK+FENEERKEAFI+QKI+NM A+C Sbjct: 16 RPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARC 75 Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341 A L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NP L G+PMAVG Sbjct: 76 AKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVG 135 Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521 MSMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPN Sbjct: 136 GMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPN 195 Query: 522 FIASSLDEAYLDISEVC 572 F+A+SLDEAYLDI+EVC Sbjct: 196 FMAASLDEAYLDITEVC 212 >ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera] Length = 661 Score = 320 bits (821), Expect = 8e-86 Identities = 160/197 (81%), Positives = 176/197 (89%), Gaps = 7/197 (3%) Frame = +3 Query: 3 RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161 RPWQSY TV+TNAKA EKVQ+ VYEMSKGSK+FENEERKEAFI+QKI+NM A+C Sbjct: 16 RPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEAFIRQKIDNMRARC 75 Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341 A L+A+DIS YQ VADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NP L G+PMAVG Sbjct: 76 AKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETLDNPSLRGRPMAVG 135 Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521 MSMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPN Sbjct: 136 GMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPN 195 Query: 522 FIASSLDEAYLDISEVC 572 F+A+SLDEAYLDI+EVC Sbjct: 196 FMAASLDEAYLDITEVC 212 >ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus] gi|449495765|ref|XP_004159938.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus] Length = 693 Score = 317 bits (811), Expect = 1e-84 Identities = 155/198 (78%), Positives = 176/198 (88%), Gaps = 7/198 (3%) Frame = +3 Query: 3 RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161 RPWQSYHTV+TNAKA E+VQ+IVYEMSKGSK+FENEERKEA I++KIENM A+C Sbjct: 12 RPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEATIREKIENMRARC 71 Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341 A LTA D+S+YQKVADKRI+ELE TRDLS+ WLHVDMDAFYAAVETL NPLL GKPMAVG Sbjct: 72 AQLTATDLSQYQKVADKRILELESTRDLSRIWLHVDMDAFYAAVETLSNPLLKGKPMAVG 131 Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521 MSM+STANYEARK+GVRAAMPGFIAR+LCPELI VP +F KY + S+LTRKVF +YDPN Sbjct: 132 SMSMLSTANYEARKYGVRAAMPGFIARRLCPELILVPTNFDKYNYYSDLTRKVFHRYDPN 191 Query: 522 FIASSLDEAYLDISEVCK 575 F+A+SLDEAYLDI+EVCK Sbjct: 192 FLAASLDEAYLDITEVCK 209 >gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein from Homo sapiens gb|AF194973 and contains an IMS PF|00817 domain [Arabidopsis thaliana] Length = 435 Score = 307 bits (786), Expect = 9e-82 Identities = 150/198 (75%), Positives = 173/198 (87%), Gaps = 7/198 (3%) Frame = +3 Query: 3 RPWQSYHTVFTNAKA-------EKVQKIVYEMSKGSKFFENEERKEAFIKQKIENMCAQC 161 RPW+SY+TVFTNAKA EKVQ++VYEMSKGSK+F+NEERKEA +KQKIE+M +C Sbjct: 14 RPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMKQKIEHMRDRC 73 Query: 162 ANLTAADISRYQKVADKRIIELEVTRDLSKTWLHVDMDAFYAAVETLHNPLLSGKPMAVG 341 A L++ D+S YQKV DKRI+ELE TRDLS+ WLHVDMDAFYAAVETL +P + GKPMAVG Sbjct: 74 AKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPSIKGKPMAVG 133 Query: 342 CMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPN 521 +SMISTANYEARKFGVRAAMPGFIARKLCP+LIFVP DF KYTH S+LTRKVF+ YDP+ Sbjct: 134 GLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPH 193 Query: 522 FIASSLDEAYLDISEVCK 575 FIA SLDEAYLDI+EVC+ Sbjct: 194 FIAGSLDEAYLDITEVCR 211