BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041741
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304134.1| GRAS family transcription factor [Populus tr...   142   3e-32
ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 pr...   141   6e-32
emb|CBI35869.3| unnamed protein product [Vitis vinifera]              140   1e-31
gb|ABK35066.1| nodulation signaling pathway 1 protein [Lotus jap...   139   3e-31
gb|ABK35067.1| truncated nodulation signaling pathway 1 protein ...   139   3e-31

>ref|XP_002304134.1| GRAS family transcription factor [Populus trichocarpa]
           gi|66947642|emb|CAJ00015.1| Nodulation Signaling Pathway
           1 protein homologue 2 [Populus trichocarpa]
           gi|222841566|gb|EEE79113.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 562

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/102 (65%), Positives = 77/102 (75%)
 Frame = +2

Query: 248 EGRWAEQLLNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXX 427
           EGRWAEQLLNPCA AI+ GNL+RVQHLLYVLHELASP+GDANHRLAAHGLRA        
Sbjct: 170 EGRWAEQLLNPCAAAITIGNLSRVQHLLYVLHELASPTGDANHRLAAHGLRALTHHLSSS 229

Query: 428 XXXXXXXXXPITFTSTDPRLFQRSLLKFCEISPWFTFPNTVA 553
                     +TF ST+P+ FQ++LLKF E+SPWF FPN +A
Sbjct: 230 STVSSASIGTVTFASTEPKFFQKALLKFYEVSPWFAFPNNIA 271


>ref|XP_002273108.1| PREDICTED: nodulation-signaling pathway 1 protein [Vitis vinifera]
          Length = 545

 Score =  141 bits (356), Expect = 6e-32
 Identities = 86/174 (49%), Positives = 99/174 (56%), Gaps = 2/174 (1%)
 Frame = +2

Query: 38  SEQSKKRKSPNTMNSK-SPEEQ-VSQRCRISKTSGTDAXXXXXXXXXXXXXXXXXXXXXX 211
           S+ SKKRKSP+    + +P  Q  +Q  R S+T   DA                      
Sbjct: 88  SDSSKKRKSPDDPAPRVAPNHQRKNQGRRASETEDGDAVEEAVAAKKSVGSKKATGKATG 147

Query: 212 XXXXXXXXXXXXEGRWAEQLLNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAH 391
                       EGRWAEQLLNPCA AI+ GNL+RVQHLLYVLHELAS +GDANHRLA H
Sbjct: 148 NNCNNSNSK---EGRWAEQLLNPCATAITAGNLSRVQHLLYVLHELASSTGDANHRLADH 204

Query: 392 GLRAXXXXXXXXXXXXXXXXXPITFTSTDPRLFQRSLLKFCEISPWFTFPNTVA 553
           GLRA                 PITF+ST+PR FQRSLLKF E+SPWF FPN +A
Sbjct: 205 GLRA-----LSHHLSSSVSVGPITFSSTEPRFFQRSLLKFYEVSPWFAFPNNIA 253


>emb|CBI35869.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  140 bits (354), Expect = 1e-31
 Identities = 70/102 (68%), Positives = 77/102 (75%)
 Frame = +2

Query: 248 EGRWAEQLLNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXX 427
           EGRWAEQLLNPCA AI+ GNL+RVQHLLYVLHELAS +GDANHRLA HGLRA        
Sbjct: 116 EGRWAEQLLNPCATAITAGNLSRVQHLLYVLHELASSTGDANHRLADHGLRA-----LSH 170

Query: 428 XXXXXXXXXPITFTSTDPRLFQRSLLKFCEISPWFTFPNTVA 553
                    PITF+ST+PR FQRSLLKF E+SPWF FPN +A
Sbjct: 171 HLSSSVSVGPITFSSTEPRFFQRSLLKFYEVSPWFAFPNNIA 212


>gb|ABK35066.1| nodulation signaling pathway 1 protein [Lotus japonicus]
          Length = 542

 Score =  139 bits (350), Expect = 3e-31
 Identities = 68/102 (66%), Positives = 76/102 (74%)
 Frame = +2

Query: 248 EGRWAEQLLNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXX 427
           EGRWAEQLLNPCA AI+ GN+ RVQHLLYVLHELASP+GD NHRLAAHGLRA        
Sbjct: 150 EGRWAEQLLNPCAAAIAGGNVNRVQHLLYVLHELASPTGDPNHRLAAHGLRA-LTHHLSS 208

Query: 428 XXXXXXXXXPITFTSTDPRLFQRSLLKFCEISPWFTFPNTVA 553
                     ITF ST+PR FQ+SLLKF E+SPWF+FPN +A
Sbjct: 209 SSSSPTSSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIA 250


>gb|ABK35067.1| truncated nodulation signaling pathway 1 protein [Lotus japonicus]
          Length = 519

 Score =  139 bits (350), Expect = 3e-31
 Identities = 68/102 (66%), Positives = 76/102 (74%)
 Frame = +2

Query: 248 EGRWAEQLLNPCAVAISNGNLTRVQHLLYVLHELASPSGDANHRLAAHGLRAXXXXXXXX 427
           EGRWAEQLLNPCA AI+ GN+ RVQHLLYVLHELASP+GD NHRLAAHGLRA        
Sbjct: 150 EGRWAEQLLNPCAAAIAGGNVNRVQHLLYVLHELASPTGDPNHRLAAHGLRA-LTHHLSS 208

Query: 428 XXXXXXXXXPITFTSTDPRLFQRSLLKFCEISPWFTFPNTVA 553
                     ITF ST+PR FQ+SLLKF E+SPWF+FPN +A
Sbjct: 209 SSSSPTSSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIA 250