BLASTX nr result

ID: Coptis25_contig00041738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00041738
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869795.1| hypothetical protein ARALYDRAFT_914305 [Arab...   153   8e-52
gb|EEC81473.1| hypothetical protein OsI_24798 [Oryza sativa Indi...   137   4e-48
ref|NP_001058842.1| Os07g0134500 [Oryza sativa Japonica Group] g...   137   4e-48
ref|XP_002461963.1| hypothetical protein SORBIDRAFT_02g011280 [S...   137   5e-48
dbj|BAJ98325.1| predicted protein [Hordeum vulgare subsp. vulgare]    138   1e-47

>ref|XP_002869795.1| hypothetical protein ARALYDRAFT_914305 [Arabidopsis lyrata subsp.
            lyrata] gi|297315631|gb|EFH46054.1| hypothetical protein
            ARALYDRAFT_914305 [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score =  153 bits (386), Expect(2) = 8e-52
 Identities = 68/124 (54%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12   FPQCKLHHLLQDDSFSDHLKNFFNAIWHAFIYLLGHSYASLAGTLLLLIAAFLFVPSKVS 191
            FPQCKL H+L+ DSFS HL +FF  +W +F+Y++  SY S  G L+LLI A +FVPSK+S
Sbjct: 707  FPQCKLGHILRGDSFSGHLGSFFGTVWSSFVYVIEQSYVSFTGVLMLLITAIMFVPSKIS 766

Query: 192  *KRRVIIGFLHVSAHTVSDXXXXXXXXXGIETCIRHQ-LANSGYHTRYEWYRTLESEHFP 368
             ++R++IG LHVSAH  +          GIE CI+H+ LA SGYHT Y+WY+++E+EHFP
Sbjct: 767  RRKRLLIGILHVSAHLTAALILMLLLELGIEICIQHKLLATSGYHTLYQWYKSVENEHFP 826

Query: 369  DPTG 380
            DPTG
Sbjct: 827  DPTG 830



 Score = 75.9 bits (185), Expect(2) = 8e-52
 Identities = 36/52 (69%), Positives = 43/52 (82%)
 Frame = +2

Query: 362 FPRPNWATGLRARMEQWTFGLYPACLKYLMSAFDIPEVMAVTSSDI*KKGMQ 517
           FP P   TGLR R+EQWT G YPAC+KYLMSAFDIPEVMAVT ++I ++GM+
Sbjct: 825 FPDP---TGLRDRIEQWTLGFYPACIKYLMSAFDIPEVMAVTRTNICREGME 873


>gb|EEC81473.1| hypothetical protein OsI_24798 [Oryza sativa Indica Group]
          Length = 935

 Score =  137 bits (346), Expect(2) = 4e-48
 Identities = 64/124 (51%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  FPQCKLHHLLQDDSFSDHLKNFFNAIWHAFIYLLGHSYASLAGTLLLLIAAFLFVPSKVS 191
           FPQC    +L++DS++D + +FF A+W+    +L HSY SLAG + LL+ +F FVP+K+S
Sbjct: 624 FPQCDSFRILREDSWADRVNSFFTAMWNVVFEILEHSYVSLAGVVTLLMVSFFFVPTKLS 683

Query: 192 *KRRVIIGFLHVSAHTVSDXXXXXXXXXGIETCIRHQ-LANSGYHTRYEWYRTLESEHFP 368
            +RR ++GFLH  AH  S           IE CIR+  LA SGYHT YEWYR +ESEHFP
Sbjct: 684 RRRRALLGFLHAVAHLTSAVILMLLMELAIEICIRNNLLATSGYHTLYEWYRKVESEHFP 743

Query: 369 DPTG 380
           DPTG
Sbjct: 744 DPTG 747



 Score = 79.0 bits (193), Expect(2) = 4e-48
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +2

Query: 362 FPRPNWATGLRARMEQWTFGLYPACLKYLMSAFDIPEVMAVTSSDI*KKGMQ 517
           FP P   TGLR R+EQWT GLYPAC+KYLMSAFDIPEVMAVT S I +KG++
Sbjct: 742 FPDP---TGLRTRLEQWTLGLYPACIKYLMSAFDIPEVMAVTRSTICRKGIE 790


>ref|NP_001058842.1| Os07g0134500 [Oryza sativa Japonica Group]
           gi|34394414|dbj|BAC83511.1| unknown protein [Oryza
           sativa Japonica Group] gi|113610378|dbj|BAF20756.1|
           Os07g0134500 [Oryza sativa Japonica Group]
          Length = 527

 Score =  137 bits (346), Expect(2) = 4e-48
 Identities = 64/124 (51%), Positives = 84/124 (67%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  FPQCKLHHLLQDDSFSDHLKNFFNAIWHAFIYLLGHSYASLAGTLLLLIAAFLFVPSKVS 191
           FPQC    +L++DS++D + +FF A+W+    +L HSY SLAG + LL+ +F FVP+K+S
Sbjct: 216 FPQCDSFRILREDSWADRVNSFFTAMWNVVFEILEHSYVSLAGVVTLLMVSFFFVPTKLS 275

Query: 192 *KRRVIIGFLHVSAHTVSDXXXXXXXXXGIETCIRHQ-LANSGYHTRYEWYRTLESEHFP 368
            +RR ++GFLH  AH  S           IE CIR+  LA SGYHT YEWYR +ESEHFP
Sbjct: 276 RRRRALLGFLHAVAHLTSAVILMLLMELAIEICIRNNLLATSGYHTLYEWYRKVESEHFP 335

Query: 369 DPTG 380
           DPTG
Sbjct: 336 DPTG 339



 Score = 79.0 bits (193), Expect(2) = 4e-48
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +2

Query: 362 FPRPNWATGLRARMEQWTFGLYPACLKYLMSAFDIPEVMAVTSSDI*KKGMQ 517
           FP P   TGLR R+EQWT GLYPAC+KYLMSAFDIPEVMAVT S I +KG++
Sbjct: 334 FPDP---TGLRTRLEQWTLGLYPACIKYLMSAFDIPEVMAVTRSTICRKGIE 382


>ref|XP_002461963.1| hypothetical protein SORBIDRAFT_02g011280 [Sorghum bicolor]
           gi|241925340|gb|EER98484.1| hypothetical protein
           SORBIDRAFT_02g011280 [Sorghum bicolor]
          Length = 936

 Score =  137 bits (344), Expect(2) = 5e-48
 Identities = 64/124 (51%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  FPQCKLHHLLQDDSFSDHLKNFFNAIWHAFIYLLGHSYASLAGTLLLLIAAFLFVPSKVS 191
           FPQC    +L +DS++  +  FF+A+W+A   +L  SY SL G + LL+ +F FVP+K+S
Sbjct: 618 FPQCDSFRILHEDSWAGRINGFFSAMWNAIFEILERSYVSLGGVVTLLMVSFFFVPTKLS 677

Query: 192 *KRRVIIGFLHVSAHTVSDXXXXXXXXXGIETCIR-HQLANSGYHTRYEWYRTLESEHFP 368
            +RRV++GFLH +AH  S           IE CIR H LA SGYHT YEWYR +ESEHFP
Sbjct: 678 RRRRVLLGFLHAAAHLTSAVLLMLLMELAIEICIRNHLLATSGYHTLYEWYRKVESEHFP 737

Query: 369 DPTG 380
           DPTG
Sbjct: 738 DPTG 741



 Score = 79.3 bits (194), Expect(2) = 5e-48
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = +2

Query: 362 FPRPNWATGLRARMEQWTFGLYPACLKYLMSAFDIPEVMAVTSSDI*KKGMQ 517
           FP P   TGLR R+E WTFGLYPAC+KYLMSAFDIPEVMAVT S I +KG++
Sbjct: 736 FPDP---TGLRTRLEHWTFGLYPACIKYLMSAFDIPEVMAVTRSTICRKGIE 784


>dbj|BAJ98325.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  138 bits (347), Expect(2) = 1e-47
 Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
 Frame = +3

Query: 12  FPQCKLHHLLQDDSFSDHLKNFFNAIWHAFIYLLGHSYASLAGTLLLLIAAFLFVPSKVS 191
           FPQC L H+L ++++S  L++F + IW A +Y+  HSY S  G+L LL+A++ FVPSK++
Sbjct: 225 FPQCNLVHILNEETWSGRLQSFSSTIWSALLYIFEHSYVSSVGSLTLLMASYSFVPSKLT 284

Query: 192 *KRRVIIGFLHVSAHTVSDXXXXXXXXXGIETCIR-HQLANSGYHTRYEWYRTLESEHFP 368
            K+R IIG LHV AH  +          GIE CIR H LA SGYH  Y+WYR++ESEHFP
Sbjct: 285 RKKRAIIGGLHVVAHLTAALVLMLLMELGIEICIRNHLLATSGYHPLYDWYRSMESEHFP 344

Query: 369 DPTG 380
           DPTG
Sbjct: 345 DPTG 348



 Score = 76.6 bits (187), Expect(2) = 1e-47
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = +2

Query: 362 FPRPNWATGLRARMEQWTFGLYPACLKYLMSAFDIPEVMAVTSSDI*KKGM 514
           FP P   TGLR R+EQWT GLYPAC+KYLMSAFD+PE+MAVT  +I K GM
Sbjct: 343 FPDP---TGLRTRLEQWTLGLYPACIKYLMSAFDVPEIMAVTRINICKNGM 390


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